Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g0659 ATGAGAAGCCATATCCAATTTCTGTTAGGCCTCACGCTCTTCAGCATTCTCTGTCTCGTTCAAACCAAATCCATCATCGAACCTTGCTCCTCCTCAGACTCCTGCTTCTCGCTTCTCTCCTTCGTCGTCCCCTGGGACTCCAAGCTCTCTGAAATCGCCTCCCGCTTCCAGGTAAATGTCTCCGACATCCTCGCCGCCAACTCCGTCTGGCCGATATCTCAGAAACTCTCCGATCAGATCATCAGATCCAAATCCATCGTGAAGATCCCAATGTCGTGCCCTTGCGTCGACGGAATCCGAAGATCCATGTCCACAATCTACACCGTGCTAGCATCGGACACACTCGAGACCATATCGGAGGGATTCGGCGGGCTGTTGAGCGCCGACCAGATAGCGACGGTGAACAGCATCAATGCGACAAATCGGTTAACGAACGGAGGGAGATTGGTGATACCGTTGCCGTGTTCGTGCTTGAATAATGTGAGGAACGGCGAAACAACAGTGTATATGTCGTATGTGGTGAGAGAGGGAGAGAGCTTGAGGAGTATAGCGTCGGGCTCAAAAACAACAGTCTCTGATTTGGAAGCGGTCAATGGATTGAGTCACGACTCGGTTGAACCAGGAGATGTCGTTGCCGTTCCTCTTGCAGCATGTTCTTCTGCAGCACTGAACTGGTACAACGAGAGTCTCATTGTCCCCAATGGCTCATATGCTCTTACTGCCTCCAACTGCATCAAATGCTCCTGTAGCCCCATTGATCTCAGGCTGCAGTGTTATCCATCTGCTTTACCACTTCCCTGCTTCAACTTACAGTGCAAAGATTCCAATCTTGTAATTGGAGACCAACATGTCACTTATTTCAATCCTGGCTGTAATGTCACTCAGTGTGTATATCGTGGCCACAGAGGTGGTAAGATCCTAAAAAGTGTGTCAAAATCTTCTTATCTCAAGTGCCCAGAAAATGAGACTTCTAATGCAGCACCTACTCCTTGGCCATCAATAAATTTCAATCCTTCGATTATGCCATTTGGGGAACTTTCTCCATACCCGTCACCTAGTCCTGTTTCTGATGCTTTGATGATGATGCAGACCACTCAAGTTTCAATCAGCTTGCTCCTACTATTCATTTGGATATGTTTCCTATGA 1146 0.4808 MRSHIQFLLGLTLFSILCLVQTKSIIEPCSSSDSCFSLLSFVVPWDSKLSEIASRFQVNVSDILAANSVWPISQKLSDQIIRSKSIVKIPMSCPCVDGIRRSMSTIYTVLASDTLETISEGFGGLLSADQIATVNSINATNRLTNGGRLVIPLPCSCLNNVRNGETTVYMSYVVREGESLRSIASGSKTTVSDLEAVNGLSHDSVEPGDVVAVPLAACSSAALNWYNESLIVPNGSYALTASNCIKCSCSPIDLRLQCYPSALPLPCFNLQCKDSNLVIGDQHVTYFNPGCNVTQCVYRGHRGGKILKSVSKSSYLKCPENETSNAAPTPWPSINFNPSIMPFGELSPYPSPSPVSDALMMMQTTQVSISLLLLFIWICFL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g0659 381 ProSiteProfiles LysM domain profile. 170 213 IPR018392 -
Acco01g0659 381 CDD LysM 105 151 IPR018392 -
Acco01g0659 381 Gene3D LysM domain 161 222 IPR036779 -
Acco01g0659 381 SMART LysM_2 49 90 IPR018392 -
Acco01g0659 381 SMART LysM_2 171 214 IPR018392 -
Acco01g0659 381 SMART LysM_2 106 152 IPR018392 -
Acco01g0659 381 ProSiteProfiles LysM domain profile. 105 151 IPR018392 -
Acco01g0659 381 CDD LysM 171 213 IPR018392 -
Acco01g0659 381 Pfam LysM domain 172 214 IPR018392 -
Acco01g0659 381 Pfam LysM domain 49 90 IPR018392 -
Acco01g0659 381 Pfam LysM domain 107 152 IPR018392 -
Acco01g0659 381 Gene3D LysM domain 101 160 IPR036779 -
Acco01g0659 381 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 4 321 - -
Acco01g0659 381 SUPERFAMILY LysM domain 170 214 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g0659 Acco-ChrAcco01 7722601 7734823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g0659 7 319 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 44.304 1.23e-80 251