Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g4333 ATGGCCGCCATCAAACGGTCGCAAGCGAACCAGAGGAGGCATCCGGAGAGCTTCCATTTGTTTCAGATGCATAACCAGCAGAATCATCAAACGGCGTCGTTATTGAAGGTGGAGCTTAAGCACTTCGTTTTGTCGATTCTCGATGATCCGATTGTGAGTAGGGTTTTCGGCGAAGTAGGGTTTCGGAGTTGCGACGTCAAGCTCGCGTTGCTTCAACCGCCGGTTGTGCAGCAACCTTCTCGATTCTCTCGGAGCCGGCTGCAGCCGGTTTTCCTGTGTAATTTGACCGGTTCCGATACCGGACGGCCCGGTTCCAATTTCAACTTCAAATACCCTTTTTTGGGAAATTCTGGATTCATGGATGAGAATTGTAGAAGAATCGGAGAGGTTCTTGTGAGGAAGACGAAGAGAAACCCTATATTGATAGGCGTTTACGCAAGAAATGCAATTCGGAATTTCATGGAGTCAGTACTACAGAAAGGTGATCAGGAGGGTGTGATGCCTGCAGGAATAGCAGGATTGACTGTGACTTCCATTGAGAAAGAAATTTCTGAGGTTCTTGGTGAAGAAGGTGGGAGTGAAGAAAAGATGGGTTTGAAATTGAAGGAGTTGAGTCGTTCATTTGAGCAATGCTCTGGTCCGGGTATCGCGGTGAACTTCGGTGAGCTCGAGGGGTTCGTTCGAGAAGGTGTTCCTTGCCGTGCTGCGAGCTTTGTAGTGTCACAATTGACAAGGTTATTGGAGGTTCATGGTGAGAAAATATGGGTGATGGGTGTGGCTGGAACCTCTGAGACATATGCTAAGTTCCTAGCATTGTTTCCTAATGTAGAAAAGGATTGGGATCTGCATTTACTGACTATGACATCTACTACACCTTCAATGGAAGGGCTTTACTCTAAATCTGGCTTGATGGGGTCCTTTGTTCCACTTGGTGGGTTCTTTTCTTCACCTTCTGAATTCAAAAATCCACTAAGCTGTATAAATCCAAGTTTTACTCGTTGTCACTCCTGCAATCAAAAGTATGAACAAGAAGTTGCTGATATTCTTAAAGTAGGTCCAACTACCTCAATATCTGGTTACTCAACAATCTTGCCTCGGTCCGAAAAGTCTAGTGTGAACACAGATCAAGGATTGGATGTGGCAAAGACTGCTGAAGACAAAGCAAGTTTGAATGCTAAGATCTTGGGATTGCAAAAGAAATGGGGTGATTTTTGTGAAAGACTTCATCACAACCAGTCTGTACCTGACTTTGATGCTTCCCAAACAAGGTCTCAAGTTCCAATCCTTGGGGGCTTTCAGTTTCATTCTAGTTTAAAGGAAAGTAGCAGTAAACAGATATCGCCAGTTCCAGTATCATCTGATATTGCTAGTGTTAATACTGGATCTGACCAGGTAGCAAAAGTTTCAAGTATGTTTGAGAGCAGATCATCTTCTTCACCCCTCACTCCTGTGACCACAGATTTGGGATTGGGAACAATCTATAGATCAGCTACTCGGGAACCAAACACCTGGAAACCCGAAAGTCATAAAGAGCATCTTCAGGTTTCGAATGATAACAATTTACACCAAGTTGCTGGATCCTCTTCATGCTCTGGTCCAAGTTTAGACGGGAAATTTAATTCTGTAGACTTCAAGTCTCTTAATCAACTTCTCGCTGAACAGATCGGTTGGCAAGACGAGGCCATATGTGCTATTGTTCGAACTTTGTCCCTTCGTAGGTCTGGTAGAGGAAAGCATTGTGGTTCGCATGTTAGAGGAGACGTATGGTTTGCTTTCTTTGGACCAGATAGATTTGGAAAGAAGAAAATTGCTTCAGTACTTACGAAGATAATATTTGGAAACACAGAAAGCTTGATATTTGTGGATTTGAACTCCCCAGATAGGGCGGCTTACCCATTAAACTCAATATTCGAAAGCGATAATTCTTGTTGTTATGATATGCTTAAAAGGAAAACAGTGGTGGACTATATTGCTGGGGAGCTGAAAGAGGTTGAAGACGACATTGACGACAAGAGCAATGAATCCTTAGGTGAACTGCATTCAGAAGCCTGGTTAAATGATTTCTGTGATCAAATGGATGAGAAAGTTGTTTTCAAGCCGTTAAATTTCGACGCGCTTGctgagaaaatattaaaaagcatCAGCACACAATTTCGGAGGACATTCGGATCGGAGTTTCTTCTGGAAATTGATTATGAGGTCATGATACAGATACTTGCAAATACTTGGCTAGCAGACAAGAAAAATGCAGTGGAGGATTGGATCGAACATGTGCTTGGAAAAAGCTTCAATGAAGCCAAACAGAAATATCAGCTTTCAAAAGTTGAGTTAGTGATGAAACTGGTTTCCTGTGAAGGCATTTTTGTGGAAGAACATGCTCCTGGTGTGTGCCTTCCAGCTAGAATTAACTTGAACTAA 2418 0.4276 MAAIKRSQANQRRHPESFHLFQMHNQQNHQTASLLKVELKHFVLSILDDPIVSRVFGEVGFRSCDVKLALLQPPVVQQPSRFSRSRLQPVFLCNLTGSDTGRPGSNFNFKYPFLGNSGFMDENCRRIGEVLVRKTKRNPILIGVYARNAIRNFMESVLQKGDQEGVMPAGIAGLTVTSIEKEISEVLGEEGGSEEKMGLKLKELSRSFEQCSGPGIAVNFGELEGFVREGVPCRAASFVVSQLTRLLEVHGEKIWVMGVAGTSETYAKFLALFPNVEKDWDLHLLTMTSTTPSMEGLYSKSGLMGSFVPLGGFFSSPSEFKNPLSCINPSFTRCHSCNQKYEQEVADILKVGPTTSISGYSTILPRSEKSSVNTDQGLDVAKTAEDKASLNAKILGLQKKWGDFCERLHHNQSVPDFDASQTRSQVPILGGFQFHSSLKESSSKQISPVPVSSDIASVNTGSDQVAKVSSMFESRSSSSPLTPVTTDLGLGTIYRSATREPNTWKPESHKEHLQVSNDNNLHQVAGSSSCSGPSLDGKFNSVDFKSLNQLLAEQIGWQDEAICAIVRTLSLRRSGRGKHCGSHVRGDVWFAFFGPDRFGKKKIASVLTKIIFGNTESLIFVDLNSPDRAAYPLNSIFESDNSCCYDMLKRKTVVDYIAGELKEVEDDIDDKSNESLGELHSEAWLNDFCDQMDEKVVFKPLNFDALAEKILKSISTQFRRTFGSEFLLEIDYEVMIQILANTWLADKKNAVEDWIEHVLGKSFNEAKQKYQLSKVELVMKLVSCEGIFVEEHAPGVCLPARINLN 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g4333 805 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 673 805 - -
Sto5g4333 805 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 662 - -
Sto5g4333 805 Gene3D - 535 735 IPR027417 -
Sto5g4333 805 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 673 805 - -
Sto5g4333 805 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g4333 Sto-Chr5 52026487 52030501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g4333 - - gmx:100776148 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2166 9 25361680 25366821 Sto5g4333 5 52026487 52030501 CCT
Sto5g4333 5 52026487 52030501 Sto5g4333 5 52026487 52030501 ECH
Sto5g4333 5 52026487 52030501 Sto9g2544 9 28046176 28050551 ECH
Sto5g4333 5 52026487 52030501 Sto5g1501 5 10384378 10389421 ECH
Sto9g2166 9 25361680 25366821 Sto5g4333 5 52026487 52030501 ECH
Sto8g1119 8 7083430 7086430 Sto5g4333 5 52026487 52030501 ECH
Sto13g3014 13 34913968 34917301 Sto5g4333 5 52026487 52030501 ECH