Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1119 ATGAGAACCGGAAACTGCGGTGTGCAACAGGGGCTAACCGCAGAGGCGGCGAGCGTGGTGAAAGCAGCGGTTAGCCTTGCGAAGCGTCGTGGTCACGCCCAAGTCACACCCCTCCACGTGGCAAACACCATGCTCTCCGCTTCCAACGGCCTCCTCCGCACCGCCTGCCTTCAGTCTCACTCCCACCCTCTTCAGTGCAAAGCCTTGGAGCTCTGCTTCAACGTCGCCCTCAACCGCCTCCCTGCCTCCAATTCCTCCTCCCCCATCCCCCTCTTGGGCCCATCTCCCTCCCACTCTCACTCTCCTTCCATCTCCAACGCTCTCGTTGCCGCCTTCAAGCGGGCCCAGGCCCACCAGCGCCGAGGTTCCATCGAGACTCAGCAGCAGCCTCTGCTTGCCCTCAAGATAGAGCTGGAGCAGCTCATCATTTCTATTCTGGATGACCCCAGTGTTAGCCGCGTCATGCGTGAGGCTGGCTTCTCCAGCACCCAGGTCAAAACCAATGTGGAACAAGCCGTGTCCTTGGATATTTCTAATAATCCTAAGGATTGCGTCAGGGAGGAGGATGTGAGGAGTTTGGTGGATTATTTGAGGCGGACCAGGAGGAGTACGGTTGTTGTGGGAGAGTGTGTGGACAGTCTTGAGGGTGTGGTTCGAGCGCTGATGGACAAGGCTGAGAGAGGAGAGCAGCTGGTTCATGATTTGAGAGATGTTAAGTttattcctttctctctctctgcttTTGAGCATTTAAGTAGAGTAGAGGTTGAGAAGAGGATTGAGGAGCTCACCCTCAGGGGCTCTCATCATAATGGGAAAGGGCTTGTTTTGTATGTTGGAGATTTGAAGTGGGTGTTTGAGTATAGGAGTAGGCATTCCTCCACCCACAATCAAGGGAGGGGCTATTACTGTCCCGTGGAGCACGTGATGATGGAGATTGGGAAGCTTCTCACCCATGGGATTGCAGCTGCAGACAGTAGTAATGCAATTAGATTTTGGGTGATTGGTATTGCCACTTTCCATACTTACACCGCATGCCAGAATGGCTATCCTTCCCTTGAGACTCTTTGGGCTCTTCATCCATTTACACTACCCGCCGGAAACTTGGGACTCACTCTCATCGCTCAAAGTGATGTACAAAAAGAGTGGAGCAAGAAGAAAGGTGAGAATGGAACAAGCTGGCTATTAGTGGAAGGAAGAGAAGAGGAGAAGCAAGCACATAGCTTCGTAGGTGAGCCTGAGGGCGCATCCGCCAAGTTTGAGACCCAACCTCCAAGCTTGCCTACCACAACTTCCAGTTCCAATACTACTTCTTCAACCCTTCCTGCATGGCTCCAACACTGCAAAAATGACACCAAACGACTCGCCTCCAACGATCAGAATTGTGTCCCAGTAGGAGATGTTTGCAAAAAGTGGAATAACTCAATAATGTGCagttcaaataataataataatgtccaAAACCAACCCTATCCTTGTGCTCAGCAACATTCTAACTACTTTTGGATCTCCGGAGGTGGTAATAACAAGTCCAATGAGGAGGAGCCCACGTTGAGAATGTACATCCCAGAGCACAACCACACAACAAATAATCCTAACTCCATTAGTGACGTCATGGAGACGGATCATGAGGAGCACTACGTGAGCAAGTTCAAAGAGTTCAACTCAGAGAACCTGAAAACCCTATGCCATGCTCTCCAAACAAAAGTGCCGTGGCAGAAACACATCATTCCAGATATCGCCACCACAGTTTTGCAATGCCGCTCCGGCATGTtcagaagaaaaggaaatattaACACAAGTAGTAGTGACATATTGAAAGAAGAGACGTGGTTGTTGTTCCAAGGCGTTGATATGGAAGGTAAAGAGAAAATAGCGAGAGAACTAGCAAGGCTAGTTTTTGGGTCCCACACCAAGGTCGTGTCTTTGGGACTCAGCAGCACTACTTTCTTCTCTTCCACCGAACATTGTAGAAACAAGAGGTCAAGAGACGAACAAAGTTGCAGCTACATTGAGAGATTCGCGGAGGCGGTTTCTAGAAACCCTCACAGCGTGTTTCTAGTAGAAGACATAAACGAAGCAGACTATTGCTCTCAAATGGGATTTAAGAGGGCAATGCAAAGAGGAAGAGTACAACACTCTAGTGGACAACAAGTTAGGCTGAGTGATGCTATCATCATTCTCAGCTGTGAAACCCTCAGATTCAGGTCAAGACCATGCTCTCCTTCTTCGTCCATCACCAACCAAAAAGCATCATCATGTGATGAACAAGATCAGAATATGAATGGTAGCTTGGATTTGGATTTGAATATCTGCATTAATGATGATAGTAATCATTGCGAAAAGGATCGCTCACTCCATGACAATAATGGCCTTCTTGAGTCCGTTGACAGGCGTATAATCTTCAACTTTCAGGAATTGTGA 2424 0.4769 MRTGNCGVQQGLTAEAASVVKAAVSLAKRRGHAQVTPLHVANTMLSASNGLLRTACLQSHSHPLQCKALELCFNVALNRLPASNSSSPIPLLGPSPSHSHSPSISNALVAAFKRAQAHQRRGSIETQQQPLLALKIELEQLIISILDDPSVSRVMREAGFSSTQVKTNVEQAVSLDISNNPKDCVREEDVRSLVDYLRRTRRSTVVVGECVDSLEGVVRALMDKAERGEQLVHDLRDVKFIPFSLSAFEHLSRVEVEKRIEELTLRGSHHNGKGLVLYVGDLKWVFEYRSRHSSTHNQGRGYYCPVEHVMMEIGKLLTHGIAAADSSNAIRFWVIGIATFHTYTACQNGYPSLETLWALHPFTLPAGNLGLTLIAQSDVQKEWSKKKGENGTSWLLVEGREEEKQAHSFVGEPEGASAKFETQPPSLPTTTSSSNTTSSTLPAWLQHCKNDTKRLASNDQNCVPVGDVCKKWNNSIMCSSNNNNNVQNQPYPCAQQHSNYFWISGGGNNKSNEEEPTLRMYIPEHNHTTNNPNSISDVMETDHEEHYVSKFKEFNSENLKTLCHALQTKVPWQKHIIPDIATTVLQCRSGMFRRKGNINTSSSDILKEETWLLFQGVDMEGKEKIARELARLVFGSHTKVVSLGLSSTTFFSSTEHCRNKRSRDEQSCSYIERFAEAVSRNPHSVFLVEDINEADYCSQMGFKRAMQRGRVQHSSGQQVRLSDAIIILSCETLRFRSRPCSPSSSITNQKASSCDEQDQNMNGSLDLDLNICINDDSNHCEKDRSLHDNNGLLESVDRRIIFNFQEL 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1119 807 MobiDBLite consensus disorder prediction 405 439 - -
Sto8g1119 807 Pfam Clp amino terminal domain, pathogenicity island component 23 52 IPR004176 -
Sto8g1119 807 Pfam Clp amino terminal domain, pathogenicity island component 136 173 IPR004176 -
Sto8g1119 807 MobiDBLite consensus disorder prediction 422 439 - -
Sto8g1119 807 Gene3D - 9 174 IPR036628 -
Sto8g1119 807 SUPERFAMILY Double Clp-N motif 12 169 IPR036628 -
Sto8g1119 807 Gene3D - 528 765 IPR027417 -
Sto8g1119 807 PANTHER PROTEIN SMAX1-LIKE 3 1 806 - -
Sto8g1119 807 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 806 - -
Sto8g1119 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 549 732 IPR027417 -
Sto8g1119 807 ProSiteProfiles Clp repeat (R) domain profile. 8 176 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1119 Sto-Chr8 7083430 7086430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1119 - - var:108320189 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1119 8 7083430 7086430 Sto9g2544 9 28046176 28050551 ECH
Sto8g1119 8 7083430 7086430 Sto5g1501 5 10384378 10389421 ECH
Sto8g1119 8 7083430 7086430 Sto8g1119 8 7083430 7086430 ECH
Sto8g1119 8 7083430 7086430 Sto9g2166 9 25361680 25366821 ECH
Sto8g1119 8 7083430 7086430 Sto5g4333 5 52026487 52030501 ECH