Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3014 ATGAGAAGTCCTGGAGGTAGCTGCTGCGGTGTCCAACTCCAACAAGGTCTAACCGCAGAGGCAGCAATGATAGTGAAGCAGGCGGTGACACTGGCGAAGCGGCGAGGCCACGCCCAAGTGACTCCCCTTCACGTGGCCAACGCCATGCTCTCCTCCCCCAACGCCCTCCTCCGCACTGCTTGCCTCCATTCTCAATCCCATTCCCATCCTCTCCACTGCAAGGCTTTGGAGCTTTGCTTCAACGTCGCCCTCAACCGCCTCCCTGCTTCCTCCACATCTGCACCACCTCCCCCTATCTTTGCTCTCCCAATGGGACCCTCCTTTTCCCCTTCCCCCTCCATCTCCAACGCCCTCCTTGCCGCCTTCAAGCGCGCCCAGGCCCACCAACGCCGCCTCGACACCACCACTACTACCCAACAGCCAGTGTTGGCCCTCAAGATAGAGTTGGAGCAACTTGTTATTTCCATTTTGGACGATCCCAGCGTGAGTCGAGTGATGCGAGAAGCTGGCTTCTCTAGCACCCTCGTCAAAATCAATGTGGAGCAAGCTTTGGATCAACTATGTTCTCAATCTCATCTTAAGGGAAACATTAATGAGTACAACCCTACAACAACATCATCATCGGATCCTCCGGTTAGGTCGGAGGATGTGTGGAGTGTGATAGATAGTTTGAGGAGGAGGAGTACTGTGGTTGTGGGTGAGTGTGTGAGTAGGCTTGAGAGTGTTGTACGAGGTGTGATGGATAAGGTTGAGAAGGGAGACGACGTGGATATTGATGAGGAGGTTGACAACAAGATTGAAGAGCTCAAGAGCCTCGCAAAGACTAGGCCTCCTGGGAAAGGAATTGTTCTGTACGTGGGAGATCTCAAATGGGTGTTGGAGTATAGGGCTCCTTCTAATTCATCATACTGTGCTGTGGAGCACATGATCAAGGAGGTTGGAAAGCTGGTGATGAATGggattaataataatgatgaggAAGAACAAGGAAGTAGGTTCAGGGTGATGGGTATAGCCACTTTTCAGACATTCATGAAATGTAAAAATGGGGATCTATCGCTAGAGAATGTTTGGGGACTTCACCCTCTTACTATTCCTGCTGCACCAAGTTTGCGCTTCAGTCTTGTCACTACTCACACATACTCAACTTGCGGTGTAGAAAAGGAGTCGAGCAAGAAAGGTGAGAATGAAAGTAAGTGGTGGGTATCAGCGGAGCCAGAATCAGAGGATGAGGAGAAGCAACCTCAACAAGTTCCAAGCTTGCACACTTCCACACCTCTTCCTGCATGGCTTCAACACTCCAAACATCACAACAAAACTCCAACCTCTGCTCATCATCAGAAGTGTGTGCCGGTGGGAGAGCAATGCAAAAAGTGGAATTCTGTGTGCACTACTCAAACTCCAATAATCCATAAACAAGGGTATGATCAATATTGTGAGAAAAACCTTACAATAGTTTCCTCTGTGTCACTATCACCTACTTCGCCCTTCTCTTATAATCCGCCACACCATCAATGGCTAGTGCCTGAACAGCCACCCAGGGACCACTCTTTCCGGATCCCTCAACCTCATCAAAATCCTAATCATAACATACCCACTCTTACATTGTACATCCCAGAGCATAACCCTATTAATATTCAACCACCACCATCCATCAATCCCACTTCAACTTCAAACCCTAACTCCACCTCCTCAACCTCTAGCGAAGCCATGGAAACGGAGTATGTAAGCAAGTTCAAAGAGGTCAGTTCAGAGAACCTGAAAACCCTAATCAACGCTCTGGAGAAACAAGTACCATGGCACAAAGATGTATTACCAGACATGGTAAGCACCATTTTACAGTGCAGGTCTGGCATGTTAAGAAGAAAAGTAGATGCTAGCAGCAGCGAGGCCAAACATGACACGTGGCTGTTCTTCCAAGGAGCCGACGTGGAGGCTAAAGAGAAAATAGGGAGAGAACTTGGACGCTTAATCTTTGGAGGTGGCCCCCACAACCTGGTTTCGATAAAGATAGTGAAGTACAGTAGTTGTAGGAAGAAGAGAAGGAGAGAGGAACAAAGTTGTAGTTGTGGTTACATAGAGGAATTGGCGGAGGCAGTGTGGAGGAATCCTCACGGAGTGTTTATGCTTGAAGGCATAGAGGAAGCGGATTCTGGTTCTCTAATGGCACTCAAGAAGGCTTTGGAAAGAGGAATATTGGTAGATTCTAATGGCAAACAAGTTTGTCTTGGTGATGCCATCATCATTCTCACCTCTCAAACTTTTTTCACTTCTTCCAACTCAACACCTTGCTCTCCTTCTTCGCTTAAGCAACACAAGGATGAtgatcataataaaaatatggcTACTTTGGATTTGAATATCTCCATTGATGATGGTAATGATTGCGATGAGGATCCATGTGTGGATGATATTGATGTTGATATTCTTGAATCCGTAGACAGACGGATTATCTTCAAAATTCAGGATTAA 2472 0.4676 MRSPGGSCCGVQLQQGLTAEAAMIVKQAVTLAKRRGHAQVTPLHVANAMLSSPNALLRTACLHSQSHSHPLHCKALELCFNVALNRLPASSTSAPPPPIFALPMGPSFSPSPSISNALLAAFKRAQAHQRRLDTTTTTQQPVLALKIELEQLVISILDDPSVSRVMREAGFSSTLVKINVEQALDQLCSQSHLKGNINEYNPTTTSSSDPPVRSEDVWSVIDSLRRRSTVVVGECVSRLESVVRGVMDKVEKGDDVDIDEEVDNKIEELKSLAKTRPPGKGIVLYVGDLKWVLEYRAPSNSSYCAVEHMIKEVGKLVMNGINNNDEEEQGSRFRVMGIATFQTFMKCKNGDLSLENVWGLHPLTIPAAPSLRFSLVTTHTYSTCGVEKESSKKGENESKWWVSAEPESEDEEKQPQQVPSLHTSTPLPAWLQHSKHHNKTPTSAHHQKCVPVGEQCKKWNSVCTTQTPIIHKQGYDQYCEKNLTIVSSVSLSPTSPFSYNPPHHQWLVPEQPPRDHSFRIPQPHQNPNHNIPTLTLYIPEHNPINIQPPPSINPTSTSNPNSTSSTSSEAMETEYVSKFKEVSSENLKTLINALEKQVPWHKDVLPDMVSTILQCRSGMLRRKVDASSSEAKHDTWLFFQGADVEAKEKIGRELGRLIFGGGPHNLVSIKIVKYSSCRKKRRREEQSCSCGYIEELAEAVWRNPHGVFMLEGIEEADSGSLMALKKALERGILVDSNGKQVCLGDAIIILTSQTFFTSSNSTPCSPSSLKQHKDDDHNKNMATLDLNISIDDGNDCDEDPCVDDIDVDILESVDRRIIFKIQD 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3014 823 Gene3D - 14 186 IPR036628 -
Sto13g3014 823 Gene3D - 562 787 IPR027417 -
Sto13g3014 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 578 754 IPR027417 -
Sto13g3014 823 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 9 823 - -
Sto13g3014 823 Pfam Clp amino terminal domain, pathogenicity island component 28 54 IPR004176 -
Sto13g3014 823 MobiDBLite consensus disorder prediction 395 426 - -
Sto13g3014 823 ProSiteProfiles Clp repeat (R) domain profile. 13 187 IPR004176 -
Sto13g3014 823 PANTHER PROTEIN SMAX1-LIKE 3 9 823 - -
Sto13g3014 823 MobiDBLite consensus disorder prediction 542 572 - -
Sto13g3014 823 MobiDBLite consensus disorder prediction 395 416 - -
Sto13g3014 823 MobiDBLite consensus disorder prediction 556 572 - -
Sto13g3014 823 SUPERFAMILY Double Clp-N motif 17 94 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3014 Sto-Chr13 34913968 34917301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3014 - - var:108320189 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3014 13 34913968 34917301 Sto9g2544 9 28046176 28050551 ECH
Sto13g3014 13 34913968 34917301 Sto5g1501 5 10384378 10389421 ECH
Sto13g3014 13 34913968 34917301 Sto13g3014 13 34913968 34917301 ECH
Sto13g3014 13 34913968 34917301 Sto9g2166 9 25361680 25366821 ECH
Sto13g3014 13 34913968 34917301 Sto5g4333 5 52026487 52030501 ECH