Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0031 ATGATCTGTATCCAGTACTTGATAATATCTATACGTGTATTTGTGGGATTTTCTGATGATCATCATGCGCAGTTACGTACTGATCAGCAGTCCACATACGTAGTATTTAAAGTTCACAGATGTGGCCATTTGTTTCATTGTAGTATAGTGCGACTTGCTTGTGATGATGAAGGCTCCAAGCATGCCCTTCCTTACCCATGTATTACTATTACCTTCTCACAAGGAGGACATTGCCAGCTTTTACGTGCATCTTTTGGCCTCTGGCTCGTGTTTGAATTACTCTTTGACAAAAAAAACTTTTCAGTGTCAGTAACGATGGAGAAGCCAGACTCTGAGACAGTTTCGAAGCAGAAGTTATACACGCGTATGCGCCTATGGGAATTTCCGGATCAGTATGTGATTGAGCCCTCGGATGGCTCTTCAGGCTCTTCTTTGTCTGTTAGTCGAAAGGATGGCTCCATGAAGCTCATTGATGAGATTCCACAATGCAGCTCCCTTCGAGTTCCCAAGATTTGGACCATTTTTGGGGTGGTTGGGATGTTGAGGCTTTTGAACGGATCATATTTGATTGTTGTAACTCAGCGTGAAAATGCTGGATCTTACTTGGGGAATCAAATTTTCAAAATTTCATCCTTGAAGACCTTTCCTTGTAATCATTCTCTTGAGAATACTCCTGCTGAGCAGAAGAAGACAGAGACTGAGTTCTCTGGGCTGCTAAATGTTGCGGAGAGGACTTCTGGTCTGTTCTTCTCATATGCCATTAATTTAACCCTGAGGTTGTTTGAGATACTTTTGTTTCCCTTTATAATTCTTCTTATGCTACTGTCGCAGGCAGAGCCTCGATTTCTCTGGAACAATTATATGCTGGAAGTCCTCATAGATAACAAGCTTGACCCATACATACTACCTGTTGTCCAAGGATGTATCCTTATCCCAATGTTTCTCCTTAACCAATCATTAGGCTTTCATCACTTTCAATCAGCAATTGGGAAGGACATAATTGACATCACTTTAATTGCAAGGAGATGCTCGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACTCTGATGGTTATGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGATTAATGGGTATAAAGCTGCTTTTGTTCAGATTCGTGGTTCAATCCCATTGCTCTGGGAGCAAATTGTTGACTTGACATATAAGCCCAAGTATGAGTTGGTAAACGTTGAAGAATCTCCTCGAGTAATGGAGCGTCATTTCATAGATTTAAGAAAAAAATATGGGGCCGTGATAGCTGTTGATCTTATCAACAAGCATGGAGGAGAGGGGCTGCTGAATGCAAAGTTTTCAGATACAATGCAGTCTGTCGTTAGCGATGATATGAGATACCTGCACTTCGATTTTCATCATGTCTGTGGGCACATTCATTTTGACCGCCTCGCTATCCTTTATGACCAAATTTCGGATTTCCTTGAGAGGAATGGTTATCTTCTGATGAATGAAAAGGGTGAGAAAATGAAGGAGCAAAATGGAGTTGTGAGGACCAATTGCATTGATTGTCTAGACCGGACAAATGTAACTCAGAGCATGATAGCCCGAAATATGCTAGAAAATCAGCTTAGAAGGCTTGGTATCTTTGGTCCTGAAGAAACCATTAGTTCGCATCCAAATCTAGATGAAAGCTACAAGATCTTATGGGCTGATCATGGCGATGATATAAGTATTCAATATTCAGGCACTCCTGCTCTAAAAGGAGACTTTACCAGATTTGGGCACCGCACAATTCAAGGAATAGTGAAAGATGGCATTAATGCTCTTCTACGCTATTATCTAAATAATTTTGCTGATGGAACAAAGCAGGATGCAATTGATCTGGTGCAAGGGCATTACATAGTTTCTGCCAACCGAGATATGGCTCCTCCTTCTCAGAAAGGAGGCCTGGAATCTATAGCTTCCTTCCCTTGGGCATTGGCACTGGTTTTGATGGGGTTCTTCTTCGCAACAATGTCGTTGAGACAAGTTCGGTATGATTTTCGGCACGTGTTCATTTCGCTGATATGGGCGGGTATCAGCGTGGGCATAGCAGCATTTGTGAGGGCCAATGGTCGGGTTTTCTGCAACAGGCCTCGCCTCCTTAAGCCCAGCTCCTAA 2151 0.4235 MICIQYLIISIRVFVGFSDDHHAQLRTDQQSTYVVFKVHRCGHLFHCSIVRLACDDEGSKHALPYPCITITFSQGGHCQLLRASFGLWLVFELLFDKKNFSVSVTMEKPDSETVSKQKLYTRMRLWEFPDQYVIEPSDGSSGSSLSVSRKDGSMKLIDEIPQCSSLRVPKIWTIFGVVGMLRLLNGSYLIVVTQRENAGSYLGNQIFKISSLKTFPCNHSLENTPAEQKKTETEFSGLLNVAERTSGLFFSYAINLTLRLFEILLFPFIILLMLLSQAEPRFLWNNYMLEVLIDNKLDPYILPVVQGCILIPMFLLNQSLGFHHFQSAIGKDIIDITLIARRCSRRNGTRMWRRGADSDGYVANFVETEQIMQINGYKAAFVQIRGSIPLLWEQIVDLTYKPKYELVNVEESPRVMERHFIDLRKKYGAVIAVDLINKHGGEGLLNAKFSDTMQSVVSDDMRYLHFDFHHVCGHIHFDRLAILYDQISDFLERNGYLLMNEKGEKMKEQNGVVRTNCIDCLDRTNVTQSMIARNMLENQLRRLGIFGPEETISSHPNLDESYKILWADHGDDISIQYSGTPALKGDFTRFGHRTIQGIVKDGINALLRYYLNNFADGTKQDAIDLVQGHYIVSANRDMAPPSQKGGLESIASFPWALALVLMGFFFATMSLRQVRYDFRHVFISLIWAGISVGIAAFVRANGRVFCNRPRLLKPSS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0031 716 ProSiteProfiles Sac phosphatase domain profile. 239 579 IPR002013 GO:0016791
Lele50g0031 716 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 117 713 - -
Lele50g0031 716 Pfam SacI homology domain 175 472 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0031 Lele-ChrLele50 223869 230049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0031 114 716 Acyl Lipid Metabolism Gene Families AT5G66020 69.687 0.0 894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1253 53 21120753 21123992 Lele50g0031 50 223869 230049 CCT
Lele54g1226 54 17747283 17750538 Lele50g0031 50 223869 230049 CCT
Lele55g0233 55 1436130 1439417 Lele50g0031 50 223869 230049 CCT
Lele56g0221 56 1799227 1802463 Lele50g0031 50 223869 230049 CCT
Lele50g0031 50 223869 230049 Lele51g0028 51 193091 198769 hybridization
Lele50g0031 50 223869 230049 Lele52g0033 52 218644 224728 hybridization