Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0033 ATGCGCAGTTATGCCCTGATCAGCAGTCCACATACGGAGTATTTAGAGTCCACAGATGTGGCCATTTGTTTCATTGTAGTATATCTGGCCACAGAGCCATCTCAGGCTTGTGATGATGAGGGCTACAAACATGCCCTTCCTTACCCATTAACGATGGAGAAGGCAGATTCTGAGACAGTTTCGAAGCAGAAGTTGTACACGCGTATGCGCCTATGGGAATTTCCGGATCAGTATGTGATTGAGCCCTCGGATGGCTCTTCTGGCTCTTCTTTGTCTGTTAGTCGAAAGGATGGCTCCATGAAGCTCATTGATGAGATTCCACAATGCAGCTCCCTTCGAGTTCCCAAGATTTGGACCATTTTTGGTGTGGTTGGGATGTTGAGGCTTTTGAACGGATCATATTTGATTGTTGTAACTCAGTGTGAAAATGCTGGATCTTACTTGGGGAATCCAATTTTCAAAATTTCATCCTTGAAGACCTTTCCTTGTAATCATTCTCTTGAGAATACTCCTGCTGAGCAGACAGAGACTGAGTTCTCTGGGCTGCTAAATGTTGCGGAGAGGACTTCTGGTCTGTTCTTCTCATATGCCATCAATTTAACACTGAGCGTCCAGAGACTGCATGATCTGGGGGCTCAGTCTAAATCAGTTCCTCTTTGGAGACAGGCAGAGCCTCGATTTCTCTGGAACAATTATATGCTGGAAGCCCTCATAGATTACAAGCTTGACCCATATATACTACCTGTTGTGCAAGGATGTATCCTTATCTCAATGTTTCTCCTTAACCAATCATTAGGCTTTCATCACTTTCAATCAGCGATTGGGAAGGACATAATTGACATCACTTTAATTGCAAGGAGATGCTCGAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGACTCTGATGGTTATGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGATTAATGGGTATACAGCTGCTTTTGTTCAGATTCGTGGTTCAATCCCATTGCTCTGGGAACAAATTGTTGACTTGACATATAAGCCCAAGTATGAGTTGGTAAAAGTTGAAGAATCTCCTCGAGTAATGGAGCGTCATTTCATAGATTTAAGGAAAAAATATGGGGCCGTGATAGCTGTTGATCTTATCAACAAGCATGGAGGAGAGGGGCTGCTGAATTCAAAGTTTTCAGATACAATGCAGTCTGTCGTTAGCGATGATATAAGATACCTGCACTTCGATTTTCATCATGTCTGTGGGCACATTCATTTTGACCGCCTCGCTATCCTTTATGATCAAATTTCGGATTTCCTTGAGAAGAATGGTTATCTTCTGATGAATGAAAAGGGTGAGAAAATGAAGGAGCAAAATGGAGTTGTGAGGACCAATTGCATTGATTGTCTAGACCGGACAAATGTAACTCAGAGCATGATAGCCCGAAATATGCTAGAAAATCAGCTTAGAAGGCTCGGTATCTTTGGTCCTGAAGAAACCATTAGTTCGCATCCAAATCTGGATGAAAGCTACAAGATCTTATGGGCTGACCATGGCGATGATATAAGTATTCAATATTCAGGCACTCCTGCTCTAAAAGGAGACTTTACCAGATTTGGGCACCGCACAATTCAAGGAATAGTAAAAGATGGCATTAATGCTCTTCTACGCTATTATCTAAATAATTTTGCTGATGGAACAAAGCAGGATGCAATTGATCTGGTGCAAGGGCATTACATAGTTTCTGCCAACCGATATATGGCTCCTCCTTCTCAGAAAGGAGGCCTGGAATCTATAGCTTCCTTCCCTTGGGCATTGGCATTGGTTTTGATGGGGTTCTTTTTTGCAACAATGTCGTTGAGACAAGTTCGGTATGATTTTCGGCACGTGTTCATTTCGCTGATATGGGCGGGTATCAGCGTGGGCATAGCTGCATTTGTGCGGGCCAATGGTCGGGTTTTCTGCAACAGGCCTCGCCTCCTCAAGCCCCGCTCCTAA 1986 0.434 MRSYALISSPHTEYLESTDVAICFIVVYLATEPSQACDDEGYKHALPYPLTMEKADSETVSKQKLYTRMRLWEFPDQYVIEPSDGSSGSSLSVSRKDGSMKLIDEIPQCSSLRVPKIWTIFGVVGMLRLLNGSYLIVVTQCENAGSYLGNPIFKISSLKTFPCNHSLENTPAEQTETEFSGLLNVAERTSGLFFSYAINLTLSVQRLHDLGAQSKSVPLWRQAEPRFLWNNYMLEALIDYKLDPYILPVVQGCILISMFLLNQSLGFHHFQSAIGKDIIDITLIARRCSRRNGTRMWRRGADSDGYVANFVETEQIMQINGYTAAFVQIRGSIPLLWEQIVDLTYKPKYELVKVEESPRVMERHFIDLRKKYGAVIAVDLINKHGGEGLLNSKFSDTMQSVVSDDIRYLHFDFHHVCGHIHFDRLAILYDQISDFLEKNGYLLMNEKGEKMKEQNGVVRTNCIDCLDRTNVTQSMIARNMLENQLRRLGIFGPEETISSHPNLDESYKILWADHGDDISIQYSGTPALKGDFTRFGHRTIQGIVKDGINALLRYYLNNFADGTKQDAIDLVQGHYIVSANRYMAPPSQKGGLESIASFPWALALVLMGFFFATMSLRQVRYDFRHVFISLIWAGISVGIAAFVRANGRVFCNRPRLLKPRS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0033 661 Pfam SacI homology domain 121 417 IPR002013 GO:0016791
Lele52g0033 661 ProSiteProfiles Sac phosphatase domain profile. 183 524 IPR002013 GO:0016791
Lele52g0033 661 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 63 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0033 Lele-ChrLele52 218644 224728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0033 60 661 Acyl Lipid Metabolism Gene Families AT5G66020 70.744 0.0 928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1253 53 21120753 21123992 Lele52g0033 52 218644 224728 CCT
Lele54g1226 54 17747283 17750538 Lele52g0033 52 218644 224728 CCT
Lele55g0233 55 1436130 1439417 Lele52g0033 52 218644 224728 CCT
Lele56g0221 56 1799227 1802463 Lele52g0033 52 218644 224728 CCT
Lele49g0026 49 173992 179057 Lele52g0033 52 218644 224728 hybridization
Lele50g0031 50 223869 230049 Lele52g0033 52 218644 224728 hybridization