Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0028 ATGCGCCTATGGGAATTTCCGGATCAGTATGTGATTGAGCCCTCGCACGGCTCTTCTGGCTCTTCTTTGTCTGTTAGTCGAAATGATGGCTCCATGAAGCTCATTGACGAGATTCCACAATGCAGCTCCCTTCGAGTTCCTAAGATTTGGACCATTTTTGGTGTCGTTGGGATGTTGAAGCATTTGACTGGATCATATTTGATTGTTGTCACTCAGTGTGAAAATGCTGGATCTTACTTGGGAAATCCAATTTTCAAAATTTCATCCTTGAAGACCTTTCCTTGTAATCATTCTCTTGAGAGCACTCCTGCTGAGCAGAAAACAGATACTGAGTTCTCTGGGCTGCTAAATGTTGCAGAGAGGACTTCTGGTCTGTTCTTCTCATATGCCATCAATTTAACCCTGAGCGTCCAGAGACTGAATGATCTGGGGGATCAGTCTAGATCGGTTCCTCTTTGGAGACAGGCAGAACCTCGGTTTCTCTGGAACAATTATGTGCTGGAAGTTCTCATAGATAACAAGTTGCATTTCATGAAAGGAACTCGGATGTGGAGAAGAGGAGCTGACTCTGATGGCTGTGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGATTAATGGGTATACAGCTGCTTTTGTTCAGATTCGTGGTTCAATCCCATTGCTTTGGGAGCAAATTGTTGACTTGACATATAAGCCTAAGCCTGAGTTGGTGAAAGTTGAAGAATCTCATGGAGGAGAGGGGCTGCTGAATGCAAAATTTGCAGATACAGTGCAATCTGTCGTTAGCACTGATATAAGATACGTGCACTTTGATTTTCATCATGTCTGTGGGCATATTCATTTTGACCGCCTCACTATACTTTATGACCAAATTTCGGATTTCCTCGAGAGAAATGGTTATCTGCTGATGAATGAGAAGGGTGAGAAAATGAAGGAGCAAAATGGAGTTGTTAGGACCAATTGCATTGATTGTCTAGACCGGACAAATGTAACTCAGAGCATGATAGCCAGAAATATGACAGAAAATCAGCTAAGAAGGCTTGGTGTCTTTGGTCCTGATGAAACCATTAGTTCCCATCCAAATCTAGATGAAAGCTATAAGATCTTATGGGCTGACCATGGAGATGATACAAGTATTCAATATGCAGGCACTCCTGCTCTGAAAGGAGACTTTACCAGATTTGGGCACCGCACAATTCAAGGAATAGTAAAAGATGGCATTAATGCTCTTCTACGCTATAATCTAAATAATTTTGCTGATGGAACAAAGCAGGATGCAATTGATCTCGTGCAAGGACACTACATAGTTTCTGCCAACCGAGATATGGCTCTCTCTTCTCAGAAAGGAGGACTGGAATCTATAGCTTTCGGTATGATTTTCGGCACTTTCGTATCGCTAATATGGGCTGGCATCAGCGTGGGCATAGCAGCATTTGTGAGGGCCAATGGTCGGGTTTTCTGCAACAGACCTCGCCTACTCAAGCCCCGCTCTTAA 1500 0.4307 MRLWEFPDQYVIEPSHGSSGSSLSVSRNDGSMKLIDEIPQCSSLRVPKIWTIFGVVGMLKHLTGSYLIVVTQCENAGSYLGNPIFKISSLKTFPCNHSLESTPAEQKTDTEFSGLLNVAERTSGLFFSYAINLTLSVQRLNDLGDQSRSVPLWRQAEPRFLWNNYVLEVLIDNKLHFMKGTRMWRRGADSDGCVANFVETEQIMQINGYTAAFVQIRGSIPLLWEQIVDLTYKPKPELVKVEESHGGEGLLNAKFADTVQSVVSTDIRYVHFDFHHVCGHIHFDRLTILYDQISDFLERNGYLLMNEKGEKMKEQNGVVRTNCIDCLDRTNVTQSMIARNMTENQLRRLGVFGPDETISSHPNLDESYKILWADHGDDTSIQYAGTPALKGDFTRFGHRTIQGIVKDGINALLRYNLNNFADGTKQDAIDLVQGHYIVSANRDMALSSQKGGLESIAFGMIFGTFVSLIWAGISVGIAAFVRANGRVFCNRPRLLKPRS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0028 499 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 240 456 - -
Lele51g0028 499 ProSiteProfiles Sac phosphatase domain profile. 170 385 IPR002013 GO:0016791
Lele51g0028 499 Pfam SacI homology domain 174 242 IPR002013 GO:0016791
Lele51g0028 499 ProSiteProfiles Sac phosphatase domain profile. 116 168 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0028 Lele-ChrLele51 193091 198769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0028 1 499 Acyl Lipid Metabolism Gene Families AT5G66020 61.301 0.0 720
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1253 53 21120753 21123992 Lele51g0028 51 193091 198769 CCT
Lele54g1226 54 17747283 17750538 Lele51g0028 51 193091 198769 CCT
Lele55g0233 55 1436130 1439417 Lele51g0028 51 193091 198769 CCT
Lele56g0221 56 1799227 1802463 Lele51g0028 51 193091 198769 CCT
Lele49g0026 49 173992 179057 Lele51g0028 51 193091 198769 hybridization
Lele50g0031 50 223869 230049 Lele51g0028 51 193091 198769 hybridization