Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0035 ATGAATGCTTCACCCGATTCAATGCAAAGCATAATGCGGAGATGGACAAGTAAGGAACTAAAGAGGGAAGAAGGTAGGTGGCGGTACGTAGAACACGCGGGTAGGGATCCGGCGAAAGGGCCTTTGGTTATAGCAGTCCCAGTTGTTGCCATAGCCGACTCCCATTATATCACAGTACCTCTTTATCCATATTCAGTTAATGCTTTATTACAAATATTGAGACCATGGGCTGTGCAACTACGCCTCAGTAGATACTCTCCTGTTGTTGCTGTCCAACTTATCCCGTGGCTCACTCCAAATGTGCCCCATCATCTCTTTCATAAGCCGATCCGGCTGTCAACCCCGAGGTCAAAATGGAAAACTTTGGGTCAAGTCAACACTCTCTATCACAGAAGTCTTGTAACAGTAGGTGAAGTCAATGGAATGGGAGTTGAATGGGTCGTAGAGCAGGGCGAGGCGAATCTATCAGCTCTGTCAGCGTGCTCTGCAAATTACGTGCCTTTGACGCCCATCATTTTCTTGGAACGAGCGGCCACCGTGCACGCCGATAAGCCGTCCATCGTCTACGGTGATGTCAGATTTTCATGGAAGGAAACCCATGGAAGATGCCTCAGGCTCGCTTCTGCTTTGCTCAACATGGGGATTTCTCACCCTGATATTGGTTTCATGGCTATTGGATCGGGTGGGGAAGAAGATATTGTGCAAAAGTGAACTCTGATTTACTGCTATACTGATGCCGTACGTTCTATTTGGATTGACCATGTTGCAGCTTTGGCGCCAAATATTCCGGAGCTCTATGAGCTGCATTTCGCTGTTCCGATGGGCGGGGCAGTTATTTCTGCACTCAACCCCAAATTGGACGCCCCCACATTGTCTGTGATATTGGAACAATTAGAAGCTAAAGTTATGTTTGTGGACTATCAGTTCGTTGAAGTTGTCCTCAACTCGTTCAACATTATGTCCCAAGGAAAATGCAAGCCTCCCATGCTGGTTGTCATCCCAGATCATAACAAACAACCATCTTTCATTCTTAAGAATCTGCCTCCAGACACCCTGAACTTCAACCAACTGCTTGAGAAGGGACCAGCAGATTTTGAGATTAGAATGCCGAGCAACGAATGCAATCCTATATCGGCGAATTATACGTCAGGCTCCACGGGAACTCCTAAAGGAGCCATGTACAGTCACAGAGGAGCCTATCTGAATTCATTGGCGGCAATCTCGCGGTTCGATGTGAAACCAATGCCCGTGTTTCTGTGGACCGTGGACATGTTTCGCTGCAACGGGTGGTGCTTTACTTGGGCAATGGCCATTCTGGGTGGCACCAATATTTGTCTCAGAAATGTCTCCGCCAAAGCCATGTTCGATGCAATCTCTCTTCACAACGTGACCCATTTGTGCGGTCCGCCCGCACTTTTGAACATGATTGCAGATTCACCACAAAGTGAACAGAAACCTCTGCCTCTGGGTGTGAGTATCACTGTTGCTGGAGTTCTACCTCCCTTACAAGTTTTTTGCAAGGTGGCAGAACTTGGGTTCAGTGTGAATGTTGGATATGGCATGACAGAAGCAATGGGTCCAGTGCTGGTGCGACCTTGGAAACCCAATTCAGGCGATGATGAACTCCTCACGGAACAAATCAATTATGGAGATGAAGGGTTTCCCATATTAATGATGGAAGGCATAGATGTGAAAGATCCAAACACAATGGAGAGTACACCTTGTGATGGGAAAACCATTGGTGAGATTATGTTTAAAGGCAACACTATGATGCTGGGGTACCTTAAGAATCAACAATTAACCAAGGAAGCTTTTAGAGAGGGATGGTACAGAACAGGGGATCTTGCGACGAAGCAAAAGGATGGTTCCATAAAACTGAAGGACAGAGCAAAAGATATGATATATTCAAAAGGGCAGGCTGTGAGCTCGCTTGAGGTGGAGGCTGTGTTACTGAGCCACCCGAAGGTCCTGAATGCTGCTGTTGTGGGGAGATGTGATGATCATATGGTGGAGTCGCCCTTAGCAATTATTAAATTGAAAGAAGGATGTGGGGCCAACGTGGAAGATATTATCAGGTTTTGTAAATCTAGGTTGGATACTCATATGGTTCCTCAGAGTGTGGTTTTTGGAGATTTGCCGGTTAATTCAACCGGCAAGGTTCAAAAATTTCTCATCAGAGAGAATATCAAATGCGGTGGATGA 2202 0.4646 MNASPDSMQSIMRRWTSKELKREEGRWRYVEHAGRDPAKGPLVIAVPVVAIADSHYITVPLYPYSVNALLQILRPWAVQLRLSRYSPVVAVQLIPWLTPNVPHHLFHKPIRLSTPRSKWKTLGQVNTLYHRSLVTVGEVNGMGVEWVVEQGEANLSALSACSANYVPLTPIIFLERAATVHADKPSIVYGDVRFSWKETHGRCLRLASALLNMGISHPDIGFMAIGSGGEEDIVQKXTLIYCYTDAVRSIWIDHVAALAPNIPELYELHFAVPMGGAVISALNPKLDAPTLSVILEQLEAKVMFVDYQFVEVVLNSFNIMSQGKCKPPMLVVIPDHNKQPSFILKNLPPDTLNFNQLLEKGPADFEIRMPSNECNPISANYTSGSTGTPKGAMYSHRGAYLNSLAAISRFDVKPMPVFLWTVDMFRCNGWCFTWAMAILGGTNICLRNVSAKAMFDAISLHNVTHLCGPPALLNMIADSPQSEQKPLPLGVSITVAGVLPPLQVFCKVAELGFSVNVGYGMTEAMGPVLVRPWKPNSGDDELLTEQINYGDEGFPILMMEGIDVKDPNTMESTPCDGKTIGEIMFKGNTMMLGYLKNQQLTKEAFREGWYRTGDLATKQKDGSIKLKDRAKDMIYSKGQAVSSLEVEAVLLSHPKVLNAAVVGRCDDHMVESPLAIIKLKEGCGANVEDIIRFCKSRLDTHMVPQSVVFGDLPVNSTGKVQKFLIRENIKCGG 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0035 733 Gene3D - 631 731 IPR045851 -
Lele49g0035 733 Gene3D - 252 630 IPR042099 -
Lele49g0035 733 PANTHER ACYL-ACTIVATING ENZYME 159 730 - -
Lele49g0035 733 SUPERFAMILY Acetyl-CoA synthetase-like 164 727 - -
Lele49g0035 733 Pfam AMP-binding enzyme C-terminal domain 645 719 IPR025110 -
Lele49g0035 733 Pfam AMP-binding enzyme 253 635 IPR000873 -
Lele49g0035 733 Gene3D - 170 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0035 Lele-ChrLele49 239300 244842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0035 265 730 Miscellaneous Gene Families AT1G20560 48.069 4.15e-155 457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0035 49 239300 244842 Lele53g1253 53 21120753 21123992 CCT
Lele49g0035 49 239300 244842 Lele54g1226 54 17747283 17750538 CCT
Lele49g0035 49 239300 244842 Lele55g0233 55 1436130 1439417 CCT
Lele49g0035 49 239300 244842 Lele56g0221 56 1799227 1802463 CCT
Lele56g0218 56 1776795 1777670 Lele49g0035 49 239300 244842 CCT
Lele49g0035 49 239300 244842 Lele51g0037 51 249089 255365 hybridization
Lele49g0035 49 239300 244842 Lele52g0041 52 273520 277152 hybridization