Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0218 ATGGTTATGAAATACCATGCCCGCTCTATCAGTTTACCCTCTAGATCTCACCCCACGACCATTAAAGCAGACGAAGAGCTCAACAAGCTCAAGACCTGGGAAGCAACAACATCCACACCCACATCAGAATCACTTCGCACAGGCTTGTTCTTGCTTGAAGATGTCTACATAAGCTTGGACGTGCTTCTTCACATGTCCTCAATCCAACTGGCGATTTCTCAGCAGCATCAAGCTGATAACTGCGTTGAGGAGCTTTTAGATGGATCGGTTAGGGTTTTGGACATATGTGGCATCACAAGAGACATTTTGTTGCAGATAAAGGAAAACGTTGAAGCCCTTCATTCTGCTGTCAGAAGAAGAAAAGGAGACTCCTCTGTTGAAAAAAGTGTAGCAGAATACAAGTTCTTCACAAAGAATATGAAGAAGGACGTGAAGACACAGATCACAGACTTAAAGCAGATGGAAAACCGATTTGGTGCAACCCCACTTCTGAATCTTGATGATCAGATGGCTTCTGTGATAAGAGTAATCAGGGAAGCCATTTTGATGAACGTTTCAATCTTCCAATCACTTTTAACCTTCTTGGTGATGCCAAAGGAAGCAAGATGGTTTGTGGTTGCTAGCAGATGGATGCACAAAGGGACCGTGGAAGCATGTGAAGATAACTCGCAAATCGTCAATGAATTGAAGAGTGTAGATTCAGTGTTGAACAGTGTTGTGAGTGAAGGTGGTCTTCGCGTTGAGAAGGTGACGATTGTTCATATGAGATTGGAGGCTTTGGAGATGGCCATTGAAGGCCTTGAGAATGGGCTTGAGGTTGTGTTTAGGAGGTTGATCAAAACTAGAGCATCTCTCTTGAACATAATATCTCAATAG 876 0.4326 MVMKYHARSISLPSRSHPTTIKADEELNKLKTWEATTSTPTSESLRTGLFLLEDVYISLDVLLHMSSIQLAISQQHQADNCVEELLDGSVRVLDICGITRDILLQIKENVEALHSAVRRRKGDSSVEKSVAEYKFFTKNMKKDVKTQITDLKQMENRFGATPLLNLDDQMASVIRVIREAILMNVSIFQSLLTFLVMPKEARWFVVASRWMHKGTVEACEDNSQIVNELKSVDSVLNSVVSEGGLRVEKVTIVHMRLEALEMAIEGLENGLEVVFRRLIKTRASLLNIISQ 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0218 291 Pfam Protein BPS1 48 288 IPR004320 GO:0048364|GO:0048367
Lele56g0218 291 PANTHER OS06G0725500 PROTEIN 3 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0218 Lele-ChrLele56 1776795 1777670 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0037 49 248025 248894 Lele56g0218 56 1776795 1777670 CCT
Lele50g0042 50 292586 295039 Lele56g0218 56 1776795 1777670 CCT
Lele51g0039 51 258200 259075 Lele56g0218 56 1776795 1777670 CCT
Lele56g0218 56 1776795 1777670 Lele49g0035 49 239300 244842 CCT
Lele56g0218 56 1776795 1777670 Lele50g0040 50 280483 284135 CCT
Lele56g0218 56 1776795 1777670 Lele51g0037 51 249089 255365 CCT
Lele56g0218 56 1776795 1777670 Lele52g0041 52 273520 277152 CCT