Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1152 ATGTCCCTCCAAAACCCACCGTTCAAAGAACTCCCAGACGCATCACCAAAACCAGACAAGAAAAGCTTCGTCACTTCTCTAATGGAAGCAGCAACGCTCCGTACACCTTCCTTCAAAGAAGACACCTACTTCGTTTCCCACCTGAAATCCTCTGAGAAGAAAGCCCTTCAAGAGCTCAAGAAAAAGCTCGCTGCCTCCGAGGTTTCGGATTCGTACATGTGGGGCATCCCCCTCCTCGGCGGCGACGACAGAGCTGACGTCATTCTGTTGAAATTTCTCCGAGCGAGAGACTTCAGGGTGGGAGATTCGCTCAACATGCTTCTGAAATGTTTGTCTTGGAGGAAGGAGTTCGGAGCCGACGACGTCGTTGAAGAGGACTTGGGATTCAAAGAGCTTGAAGGGGTCGTCGCCTACATGCAGGGGTATGATAAAGAAGGACACCCTGTTTGCTACAATGCGTATGGTATTTTCAGAGACAAAGAAATGTACGAAAGGATCTTCGGTGACGAAGAGAAGCTGAAGAAGTTCTTGAGATGGAGAGTTCAAGTTCTTGAGAGAGGAATCAAGCTTCTTCATTTCAAACCAGGTGGGGTTAATTCTCTGATTCAGGTCACCGATTTGAAAGACATGCCCAAGAGGGAGCTCAGGGCGGCTTCCAATCACATTCTCTCTCTGTTCCAAGACAATTATCCAGAAATGGTGGCTCGTAAGATTTTCATTAATGTGCCCTGGTACTTCAGCACGCTGTATTCAATGTTCAGTCCATTTTTGACCCAAAGAACGAAGAGCAAATTTGTGATCTCCAAGGAGGGAAATGCTGCAGAGACACTCTACAAGTTCATAAGGCCTGAGGATATTCCAGTTCGGTATGGAGGACTGAGTCGGCAGAGTGATTTGCAGAATGGTCCTTCTAAACCTGCCTCTGAGTTCACCGTTAAAGGAGGAGAGAAGGTCAACATCCAAATCGAAGGAATTGAGGGGGGAGCAACGATAACATGGGACATAGTGGTGGGAGGTTGGGATTTAGAGTACAGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGCTACAGCGTCGCAGTAGAGAAGGCAAGGAAGATTGGAGCCTCAGAGGAAGCAATTCACAACTCTTTCACAACAAAAGAAGCAGGCAATCTTATCCTCTCTGTTGATAACTTTGCTTCCAGAAAGAAAAAAGTCGCGGCTTATCGCTACCTTGTTGGCAAATGCGCCACCAACAACAACAGCAACAGCAACAACGTTGTCTGA 1266 0.4731 MSLQNPPFKELPDASPKPDKKSFVTSLMEAATLRTPSFKEDTYFVSHLKSSEKKALQELKKKLAASEVSDSYMWGIPLLGGDDRADVILLKFLRARDFRVGDSLNMLLKCLSWRKEFGADDVVEEDLGFKELEGVVAYMQGYDKEGHPVCYNAYGIFRDKEMYERIFGDEEKLKKFLRWRVQVLERGIKLLHFKPGGVNSLIQVTDLKDMPKRELRAASNHILSLFQDNYPEMVARKIFINVPWYFSTLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVRYGGLSRQSDLQNGPSKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPSAEGSYSVAVEKARKIGASEEAIHNSFTTKEAGNLILSVDNFASRKKKVAAYRYLVGKCATNNNSNSNNVV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1152 421 FunFam SEC14 cytosolic factor family protein 133 308 - -
Lele44g1152 421 Gene3D GOLD domain 309 406 - -
Lele44g1152 421 ProSiteProfiles GOLD domain profile. 274 408 IPR009038 -
Lele44g1152 421 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 125 298 IPR001251 -
Lele44g1152 421 FunFam SEC14 cytosolic factor family protein 44 116 - -
Lele44g1152 421 SUPERFAMILY CRAL/TRIO N-terminal domain 38 126 IPR036273 -
Lele44g1152 421 MobiDBLite consensus disorder prediction 1 22 - -
Lele44g1152 421 SMART CRAL_TRIO_N_2 85 110 IPR011074 -
Lele44g1152 421 Pfam CRAL/TRIO, N-terminal domain 55 108 IPR011074 -
Lele44g1152 421 Gene3D - 124 308 IPR036865 -
Lele44g1152 421 Gene3D - 44 116 - -
Lele44g1152 421 Pfam CRAL/TRIO domain 133 292 IPR001251 -
Lele44g1152 421 PANTHER PATELLIN-1 18 407 IPR044834 GO:0008289
Lele44g1152 421 CDD SEC14 129 293 IPR001251 -
Lele44g1152 421 SUPERFAMILY CRAL/TRIO domain 130 294 IPR036865 -
Lele44g1152 421 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 309 409 IPR036598 -
Lele44g1152 421 SMART sec14_4 131 295 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1152 Lele-ChrLele44 20127783 20129871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1152 89 302 Acyl Lipid Metabolism Gene Families AT1G55840 27.391 1.02e-12 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1152 44 20127783 20129871 Lele37g1377 37 22592083 22592769 CCT
Lele44g1152 44 20127783 20129871 Lele38g1254 38 23362908 23363579 CCT
Lele44g1152 44 20127783 20129871 Lele39g0046 39 336726 337388 CCT
Lele44g1152 44 20127783 20129871 Lele40g1196 40 21858079 21858750 CCT
Lele44g1152 44 20127783 20129871 Lele44g1152 44 20127783 20129871 ECH
Lele41g0201 41 1625332 1627249 Lele44g1152 44 20127783 20129871 hybridization
Lele42g0195 42 1603969 1607223 Lele44g1152 44 20127783 20129871 hybridization