Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1377 ATGGCCGCCCCAGCCCCATCCCCATCCCCAGCCCCATCCGTCCTCCCCATTACCAGTACCCAACCCATCGGCGCCGGCCCCGGCGCCCCTGTCATTGAAGTTCAGCCCCCACCATTACGTGCCTTCATCTCCAAAGCCTCCGATTCCCTCCGCTACGGCATCTCCCAGCGCCGTCCGTGGGCCGAACTCCTCGACCGTACCGCATTCTCTAAACCCGAGACCTTATCCGAAGCCACCTTCCGCTTCCGCAAGAACTTCTCCTATTTCCGCGTCAATTACTACGCCATTGGCGCTCTCGCTCTCGCCGTTTCTCTCCTTACCCACCCTTTCTCTCTCCTCATCCTCTTGGGCGTTCTCGCCTCCTGGGTCTTCCTCTACGTCTTCCGACCAGCCGATCAGCCTCTCGTTCTTTTCGGTCGAATCTTCACCGATTTTGAAACCTTGGTCATGCTCTCCGGTTTGAGCCTGTGCGTTGTGTTTCTGACCAGCGTTGGGGCCATTCTGGTGTCGTCGGTGATGATAGGTGTGGCCGTTGTTTGTGTTCATGGCGCTTTGAGGATGCCGGAAGATATGTTCATGGAAGCAGAAGATAACTCGCAGCCCAACGGGTATGTCTCCTTCGTACGTGGCACAGCCGCAGTTAACGCTGCTATTGCCGCCACCGCATCTCCGGCCCCTTCAAGATAG 687 0.5793 MAAPAPSPSPAPSVLPITSTQPIGAGPGAPVIEVQPPPLRAFISKASDSLRYGISQRRPWAELLDRTAFSKPETLSEATFRFRKNFSYFRVNYYAIGALALAVSLLTHPFSLLILLGVLASWVFLYVFRPADQPLVLFGRIFTDFETLVMLSGLSLCVVFLTSVGAILVSSVMIGVAVVCVHGALRMPEDMFMEAEDNSQPNGYVSFVRGTAAVNAAIAATASPAPSR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1377 228 Pfam PRA1 family protein 54 194 IPR004895 -
Lele37g1377 228 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 19 197 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1377 Lele-ChrLele37 22592083 22592769 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0195 42 1603969 1607223 Lele37g1377 37 22592083 22592769 CCT
Lele43g1161 43 19977950 19979819 Lele37g1377 37 22592083 22592769 CCT
Lele44g1152 44 20127783 20129871 Lele37g1377 37 22592083 22592769 CCT
Lele37g1377 37 22592083 22592769 Lele39g0046 39 336726 337388 hybridization
Lele37g1377 37 22592083 22592769 Lele40g1196 40 21858079 21858750 hybridization