Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0046 ATGGCCGCCCCAGCCCCGCCCGTCCTCCCCATTACCAGTACCCAACCCATCAGCGCCGGCACCCCTGTCATTGAAGTTCAGCCCCCACCATTACGTGCCTTCATCTCCAGAGCCTCCGATTCCCTCCGCTACAGCATCTCCCAGCGCCGTCCGTGGGCCGAACTCCTCGACCGTACCGCATTCTCTAAACCCGAGACCTTATCCGAAGCCACCTTCCGCTTCCGCAAGAACTTCTCCTACTTCCGCGTCAATTACTACGCCATTGGCGCTCTCGCACTAGCCGTTTCTCTCCTTACCCACCCTTTCTCTCTCCTCATCCTCTTGGGCGTTCTCGCCGCTTGGGTCTTCCTCTACGTCTTCCGACCCGCCGATCAGCCTCTCGTTCTTTTTGGTCGAATCTTCACCGATTTTGAAACCTTGGTCATGCTCTCCGGTTTGAGCCTGTGCGTTGTGTTTCTGACCAGCGTTGGGGCCATTCTAGTGTCGTCGGTGATGATAGGTCTGGCCGTTGTTTGTGTTCATGGCGCCTTTAGGATGCCGGAAGATATGTTCCTGGAAGCACAAGATAACTCGCAGCCCAACGGGTATGTCTCATTCGTACGTGGCGCAGCCGCAGTTAACGCAGCTATTGCCGCCACCGCATCTCCGGCCCCTTCACGATAG 663 0.5732 MAAPAPPVLPITSTQPISAGTPVIEVQPPPLRAFISRASDSLRYSISQRRPWAELLDRTAFSKPETLSEATFRFRKNFSYFRVNYYAIGALALAVSLLTHPFSLLILLGVLAAWVFLYVFRPADQPLVLFGRIFTDFETLVMLSGLSLCVVFLTSVGAILVSSVMIGLAVVCVHGAFRMPEDMFLEAQDNSQPNGYVSFVRGAAAVNAAIAATASPAPSR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0046 220 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 14 189 IPR004895 -
Lele39g0046 220 Pfam PRA1 family protein 46 186 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0046 Lele-ChrLele39 336726 337388 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0195 42 1603969 1607223 Lele39g0046 39 336726 337388 CCT
Lele43g1161 43 19977950 19979819 Lele39g0046 39 336726 337388 CCT
Lele44g1152 44 20127783 20129871 Lele39g0046 39 336726 337388 CCT
Lele37g1377 37 22592083 22592769 Lele39g0046 39 336726 337388 hybridization
Lele38g1254 38 23362908 23363579 Lele39g0046 39 336726 337388 hybridization