Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1196 ATGGCCGCACCAGCCCCACCCGTCCTCCCCATTACCAGTGCCCAATCCATCGGCACTGGTGCCGGCGCCTCTGTCATTGAAGTTCAGCCCCCACCATTACGTGCCTTCATCTCCAAAGCCTCCGATTCCCTCCGCTACAGCCTCTCCCAGCGTCGCCCGTGGGTCGAACTCTTCGACCGTACCGCATTCTCTAAACCCGAGAACTTATCCGAAGCCACCTTCCGCATCCGCAAGAACTTCTCCTACTTCTGCGTCAATTACTATGCCATTGGCGCTCTCGCCCTCGCCGTTTCTCTCCTTACCCACCCTTTCTCTCTCCTCATCCTCTTGGGCGTTCTCGCCGCCTGGGTCTTCCTCTACGTCTTCCGACCCGCCGATCAGCCTCTCGTTCTTTTCGGCAGAATCTTCACCGATTTTGAAACCTTGGTCATGCTCTCCGGTTTGAGCCTGTGTGTTGTGTTTCTGACCAGCGTTGGGTCGATTCTGGTGTCGTCGGTGATGATAGGTGTGGCCGTTGTTTGCGTTCATGGCGCCTTGAGGATTCCGGAAGATATGTTCATGGAAGCACAAGAAAACTCGCAGCCCAATGGGTATGTCTCCTTCGTACGTGGTGCCGCCGCAATTAACGCTGTTATTGCCGCAACCGCCAAATCTCCGGCCCCTTCACAATAG 672 0.561 MAAPAPPVLPITSAQSIGTGAGASVIEVQPPPLRAFISKASDSLRYSLSQRRPWVELFDRTAFSKPENLSEATFRIRKNFSYFCVNYYAIGALALAVSLLTHPFSLLILLGVLAAWVFLYVFRPADQPLVLFGRIFTDFETLVMLSGLSLCVVFLTSVGSILVSSVMIGVAVVCVHGALRIPEDMFMEAQENSQPNGYVSFVRGAAAINAVIAATAKSPAPSQ 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1196 223 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 14 191 IPR004895 -
Lele40g1196 223 Pfam PRA1 family protein 48 188 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1196 Lele-ChrLele40 21858079 21858750 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0195 42 1603969 1607223 Lele40g1196 40 21858079 21858750 CCT
Lele43g1161 43 19977950 19979819 Lele40g1196 40 21858079 21858750 CCT
Lele44g1152 44 20127783 20129871 Lele40g1196 40 21858079 21858750 CCT
Lele37g1377 37 22592083 22592769 Lele40g1196 40 21858079 21858750 hybridization
Lele38g1254 38 23362908 23363579 Lele40g1196 40 21858079 21858750 hybridization