Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0201 ATGTCCCTTCAGAACCCACCGTTCAATGACCTCCCAGACGCATCCCCAAAACCAGAAAAGAAAAGCTTCGTCACTTCTCTAATGGAAGCAGCGACACTCCGTACACCTTCCTTCAAAGAAGACACCTACTTCGTTTCCCACTTGAAATCCTCCGAGAAGAAAGCCCTTCAAGAGCTCAAAAACAAGCTTGCAGCCTCCGAGGTTTCGGATTCGTCCATGTGGGGTATTCCCCTGCTCGGCGACGACGACAGAGCTGACGTCATACTGTTGAAGTTTCTCCGAGCTAGAGACTTCAGGGTGGGAGATTCGCTCAACATGCTTCTGAAATGCTTGGCTTGGAGGAAGGAGTTTGGAGCAGACGACGTCGTTGAGGAGGACTTGGGATTCAAAGAGCTCGAAGGCGTTGTCGCCTACATGCTGGGGTATGATAAAGAAGGGCACCCTGTTTGCTACAATGCGTATGGGATTTTCAGAGACAAAGAAATGTACGAAAGGATTTTCGGTGACGAAGAGAAGCTGAAGAAGTTCTTGAGATGGAGAGTTCAAGTTCTTGAAAGAGGAATCAAGCTTCTTCATTTCAAACCAGGTGGGGTTAATTCTCTGATTCAGGTCACCGATTTGAAAGACATGCCCAAGAGGGAACTCAGGGCAGCTTCCAATCATATCCTCTCTCTGTTTCAAGACAATTATCCAGAAATGGTGGCTCGTAAGATTTTCATTAATGTGCCCTGGTACTTCAGCATGCTGTATTCGATGTTCAGTCCATTTTTGACACAAAGAACGAAGAGCAAATTTGTGATCTCCAAGGAAGGAAATGCTGCAGAGACGCTCTACAAATTCATAAAGCCTGAGGATATTCCAGTTCAGTATGGAGGACTGAGTCGGCAGAGCGATTTGCAGAATGGTCCTCCTAAACCCGCTTCTGAATTCACTGTTAAAGGAGGAGAGAAGGTGAACATCCAAATCGAAGGAATTGAGGGTGGAGCAACAATAACATGGGACATAGTGGTGGGAGGGTGGGAATTAGAGTACAGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGCTACAGCATAGCCGTAGAGAAGGCAAGGAAGATTGCAGCCTCAGAAGAAGCCATTCACAACTCTTTCACCACAAAAGAAGCAGGCAATCTCGTTCTCTCTGTTGATAACTTCGCTTCCAGGAAGAAAAAAGTCGCTGCTTATCGCTACTTTGTCCGCAAATGCGCCACCAACAACGTTGTCTGA 1248 0.4679 MSLQNPPFNDLPDASPKPEKKSFVTSLMEAATLRTPSFKEDTYFVSHLKSSEKKALQELKNKLAASEVSDSSMWGIPLLGDDDRADVILLKFLRARDFRVGDSLNMLLKCLAWRKEFGADDVVEEDLGFKELEGVVAYMLGYDKEGHPVCYNAYGIFRDKEMYERIFGDEEKLKKFLRWRVQVLERGIKLLHFKPGGVNSLIQVTDLKDMPKRELRAASNHILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIKPEDIPVQYGGLSRQSDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWELEYSAEFVPSAEGSYSIAVEKARKIAASEEAIHNSFTTKEAGNLVLSVDNFASRKKKVAAYRYFVRKCATNNVV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0201 415 PANTHER PATELLIN-1 18 408 IPR044834 GO:0008289
Lele41g0201 415 SUPERFAMILY CRAL/TRIO N-terminal domain 38 126 IPR036273 -
Lele41g0201 415 MobiDBLite consensus disorder prediction 1 22 - -
Lele41g0201 415 SMART CRAL_TRIO_N_2 85 110 IPR011074 -
Lele41g0201 415 ProSiteProfiles GOLD domain profile. 274 408 IPR009038 -
Lele41g0201 415 FunFam SEC14 cytosolic factor family protein 44 116 - -
Lele41g0201 415 Gene3D - 44 116 - -
Lele41g0201 415 FunFam SEC14 cytosolic factor family protein 133 308 - -
Lele41g0201 415 Pfam CRAL/TRIO domain 133 292 IPR001251 -
Lele41g0201 415 Gene3D - 120 302 IPR036865 -
Lele41g0201 415 Gene3D GOLD domain 303 406 - -
Lele41g0201 415 CDD SEC14 129 293 IPR001251 -
Lele41g0201 415 SMART sec14_4 131 295 IPR001251 -
Lele41g0201 415 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 139 298 IPR001251 -
Lele41g0201 415 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 309 406 IPR036598 -
Lele41g0201 415 Coils Coil 49 69 - -
Lele41g0201 415 Pfam CRAL/TRIO, N-terminal domain 55 108 IPR011074 -
Lele41g0201 415 SUPERFAMILY CRAL/TRIO domain 130 295 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0201 Lele-ChrLele41 1625332 1627249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0201 89 287 Acyl Lipid Metabolism Gene Families AT1G55840 27.700 2.31e-12 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0201 41 1625332 1627249 Lele37g1378 37 22594061 22596954 CCT
Lele41g0201 41 1625332 1627249 Lele38g1255 38 23365834 23367176 CCT
Lele41g0201 41 1625332 1627249 Lele39g0045 39 332794 334665 CCT
Lele41g0201 41 1625332 1627249 Lele40g1197 40 21859926 21861847 CCT
Lele41g0201 41 1625332 1627249 Lele41g0201 41 1625332 1627249 ECH
Lele41g0201 41 1625332 1627249 Lele43g1161 43 19977950 19979819 hybridization
Lele41g0201 41 1625332 1627249 Lele44g1152 44 20127783 20129871 hybridization