Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0558 ATGTCTGCGGTCTTCTTGTTTTGGTCAACACGAGTCTCTGTTTCTTCTCACATGGCTTCTATCTCCCAAGGTCTTGTTCTGACCACCGCTATGCTTCTCTCCAGCACCGTTCTTTATCTTGGTTTCCTCAGGCAGAAGACTTTCCCTCTCCCTCATCTTCCCGGCAATTATAATTCAAATTCCCAACACCCAAACAAGAAAGTTCTCCGCTCTTGCATATACTCAGAGGAAAAGAAAAGGGAAAGCAAGAAGAAGAAGAGGGTGAAATTCGCAGATAATGTGAAGGAAGAAACCGAAACGAAGAAGAAGGATCTCCGAGAAAAACAGAGGAAGCAAAACAGAGCATCATCGAGCAGCTGCAGACACGAAATCCCAGAAATCCGACGAATGCCAGAAAATCGAATTGCTTTGTACAACGGGATTCTGAGAGATCGAGTGCACAGCAGGCTGGGATACTCTTGCTGA 465 0.4559 MSAVFLFWSTRVSVSSHMASISQGLVLTTAMLLSSTVLYLGFLRQKTFPLPHLPGNYNSNSQHPNKKVLRSCIYSEEKKRESKKKKRVKFADNVKEETETKKKDLREKQRKQNRASSSSCRHEIPEIRRMPENRIALYNGILRDRVHSRLGYSC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0558 154 MobiDBLite consensus disorder prediction 77 126 - -
Lele44g0558 154 PANTHER TRANSMEMBRANE PROTEIN 19 154 - -
Lele44g0558 154 Coils Coil 88 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0558 Lele-ChrLele44 4355380 4355960 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0558 44 4355380 4355960 Lele37g0500 37 4080110 4081040 CCT
Lele44g0558 44 4355380 4355960 Lele38g0468 38 3779475 3779795 CCT
Lele44g0558 44 4355380 4355960 Lele39g0925 39 18195775 18196726 CCT
Lele44g0558 44 4355380 4355960 Lele40g0440 40 3640381 3641290 CCT
Lele41g0796 41 17722471 17723006 Lele44g0558 44 4355380 4355960 hybridization
Lele42g0782 42 20799248 20799783 Lele44g0558 44 4355380 4355960 hybridization