Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1719 ATGGATGATTTCCCAAGTACATATGCATTTCAAAAGAAATTACTACTTCTAGCTATGCATCGCCAAATGAAAAAGTCTGTGTGGGTAGAGTGCCGATGTTGGGTCGGGTTCCGGTTTCGGGTCTTGGAGATGGGCGGTAGCTGGGTAAATTTTTGCCCCTTCATCTCAGCTCTCCAACCCCGGTCCCCAAAACTGATTCTCTTTCCTCGTGTTCCTGTCCTTTTGGTTTTGGCCGCCTCCTCCCTTACCTCCTCACCGCGGGTCGTCCCTCCTTCATCAATGGCGGAAGCTACGGCAGAAAAGGCTTCTAGTCTTGCCGAGCAATACTTTGTGAAAGAAAAAGAGGAGAAAACACAAACAGGCACAAAACCTGTGGAAGTCAAAGAAGTTGAAGTCCCCAAGGAGACGACTTCTCTAGAAGCTGTTGCTGAGAAGGTTGTGGAAGCAGCCAATGCAGTTGCCTCTGCAGTTACTGAGGAAAGCGGTGAAGTCTCTCCAGCTGCTGAAGAAAGCACTGAGTCCAACACTGATGCTTCTGAAGAAAGCAACAGTGCAACTACAGAGCAAAGTAGTGAAAATACTGATGAAAACTCGAGTGAACCCGAAGCAGCAGCAGAAGCCCCAGAAATCAAGCTTGAGACTGCTCCTGCTGATTTCCGCTTCCCAACTACAAATCAAACAAGGCACTGCTTTACTCGATATGTCGAGTATCACCGATGCACAGCTGCAAAAGGAGAAGGTGCCCCAGAATGTGACAAGTTTGCAAAATATTACCGTTCTCTTTGCCCTGGAGAATGGATTGCTTTGCCTGCATACGTATCTTGTTTTATGATTCTATGTCTGACTTCAAAAAGTGACTTGCACCCTCCTGAACTTTCAATGTTACGCAAAGAACTTTCTATTAGTGACTCCATCAACTCCATGGACATAGCTCGTTCAAGCAAAGCCTACATCTCTGTGGAGCTCAGTCTTCGTTTTTCTCTTTCTTCAATCTCAGTACTTTCCCTTTCTTCTCTCTCCCCTCTTTTGACTTCCCAGCCCAACCCTAAAATCTTAGGACTTAAGATTGACAGATGGAATGAGCAAAGGGAGAACGGAACATTCCCGGGTCCTCTGTAG 1119 0.4647 MDDFPSTYAFQKKLLLLAMHRQMKKSVWVECRCWVGFRFRVLEMGGSWVNFCPFISALQPRSPKLILFPRVPVLLVLAASSLTSSPRVVPPSSMAEATAEKASSLAEQYFVKEKEEKTQTGTKPVEVKEVEVPKETTSLEAVAEKVVEAANAVASAVTEESGEVSPAAEESTESNTDASEESNSATTEQSSENTDENSSEPEAAAEAPEIKLETAPADFRFPTTNQTRHCFTRYVEYHRCTAAKGEGAPECDKFAKYYRSLCPGEWIALPAYVSCFMILCLTSKSDLHPPELSMLRKELSISDSINSMDIARSSKAYISVELSLRFSLSSISVLSLSSLSPLLTSQPNPKILGLKIDRWNEQRENGTFPGPL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1719 372 MobiDBLite consensus disorder prediction 165 200 - -
Lele27g1719 372 Gene3D Cytochrome c oxidase, subunit VIb 206 269 IPR036549 GO:0005739|GO:0045277
Lele27g1719 372 SUPERFAMILY Cytochrome c oxidase subunit h 209 267 IPR036549 GO:0005739|GO:0045277
Lele27g1719 372 CDD Cyt_c_Oxidase_VIb 210 267 IPR003213 GO:0005739
Lele27g1719 372 Pfam Cytochrome oxidase c subunit VIb 220 267 IPR003213 GO:0005739
Lele27g1719 372 MobiDBLite consensus disorder prediction 154 207 - -
Lele27g1719 372 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B 94 372 IPR003213 GO:0005739
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1719 Lele-ChrLele27 22492906 22495651 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1719 27 22492906 22495651 Lele01g0144 01 846922 847875 CCT
Lele27g1719 27 22492906 22495651 Lele02g0149 02 831525 833793 CCT
Lele27g1719 27 22492906 22495651 Lele03g0154 03 822306 824632 CCT
Lele27g1719 27 22492906 22495651 Lele04g0146 04 829354 831637 CCT
Lele25g0365 25 2232482 2235162 Lele27g1719 27 22492906 22495651 hybridization
Lele26g0382 26 2307367 2310966 Lele27g1719 27 22492906 22495651 hybridization