Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0382 ATGGCGGAAGCTACGTCAGAAAAATCCTCTACTCTTGCCGAGCAATATTTTGTGAAAGAAAAAGAAGAGAAAACAGAAACAGGCACAAAACCTGTGGAAGTCAAAGAAGTTGAAGTCCCCAAGGAGACGACTTCTCTAGAAGCTGTTGCTGAGAAGGCTGTGCAAGCAGCCACTGCAGTTGCCCCTGCAGTTACTGAGGTAAGCAGTGATGTTACTCCAGCTGCTGAAGAAAGCACTGAATCCAACTCTGATGCTTCTGAAGGAAGCCACAATGCAACTACAGAGCAAAGTAGTGAAAATAATGATGAAAACTCAAGTGAACCAGAAGCAGCAGAAGAAACCCCAGAAATCAAGCTTGAGACTGCTCCTGCTGATTTCCGCTTCCCAACTACAAATCAAACAAGGCACTGCTTTACTCGATATGTTGAGTATCACCGATGCATAGCTGCAAAAGGAGAAGGTGCCCCAGAATGTGATAAGTTTGCAAAATATTACCGTTCTCTTTGCCCTGGGGAATGGATTGACAGATGGAATGAGCAAAGGGAGAACGGAACATTCCCTGGTCCTCTGTTAGTTCTCGACATACTAATGATCGGAGCTCCGCTAAGACAACCGTGGCCGAGGCATCAGGAGTCGTTGCCCGTATGA 648 0.4614 MAEATSEKSSTLAEQYFVKEKEEKTETGTKPVEVKEVEVPKETTSLEAVAEKAVQAATAVAPAVTEVSSDVTPAAEESTESNSDASEGSHNATTEQSSENNDENSSEPEAAEETPEIKLETAPADFRFPTTNQTRHCFTRYVEYHRCIAAKGEGAPECDKFAKYYRSLCPGEWIDRWNEQRENGTFPGPLLVLDILMIGAPLRQPWPRHQESLPV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0382 215 CDD Cyt_c_Oxidase_VIb 117 189 IPR003213 GO:0005739
Lele26g0382 215 Gene3D Cytochrome c oxidase, subunit VIb 113 191 IPR036549 GO:0005739|GO:0045277
Lele26g0382 215 MobiDBLite consensus disorder prediction 71 104 - -
Lele26g0382 215 MobiDBLite consensus disorder prediction 1 124 - -
Lele26g0382 215 Pfam Cytochrome oxidase c subunit VIb 127 186 IPR003213 GO:0005739
Lele26g0382 215 MobiDBLite consensus disorder prediction 14 42 - -
Lele26g0382 215 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 134 177 - -
Lele26g0382 215 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B 1 190 IPR003213 GO:0005739
Lele26g0382 215 FunFam Cytochrome c oxidase subunit 6B1 111 190 - -
Lele26g0382 215 SUPERFAMILY Cytochrome c oxidase subunit h 116 189 IPR036549 GO:0005739|GO:0045277
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0382 Lele-ChrLele26 2307367 2310966 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0382 26 2307367 2310966 Lele01g0144 01 846922 847875 CCT
Lele26g0382 26 2307367 2310966 Lele02g0149 02 831525 833793 CCT
Lele26g0382 26 2307367 2310966 Lele03g0154 03 822306 824632 CCT
Lele26g0382 26 2307367 2310966 Lele04g0146 04 829354 831637 CCT
Lele26g0382 26 2307367 2310966 Lele27g1719 27 22492906 22495651 hybridization
Lele26g0382 26 2307367 2310966 Lele28g0379 28 2316843 2320415 hybridization