Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0365 ATGTTGGGTCGGGTTTGCGCTTCGGGTCTTGGAGATTGGTATGTAGGACTCTCCAACCCCGGTCCGATCCCACAACTGATCCCCTTTCCTCGTCTTCCTCTCCTTTTGGTTTTGGCCGCCTCCTCCCTTACCTCCTCACCGCGGGTCGTCCCTCCTTCATCAATGGCGGAAGCTACGGCAGAAAAATCTTCTACTCTTGCCGAGCAATACTTTGTGAAAGAAAAAGAGGAGAAAACAGAAACAGGCACAAACCCTGTGGAAGTCAAAGAAGTTGAAGTCCCCAAGGAGACGACTTCTCTAGAAGCTGTTGCTGAGAAGGTTGTGGAAGCAGCCACTGCAGTTGCCTCTGCAGTTACTGAGGAAAGCGGTGAAGTCGCTCCAGCTGCTGAAGAAAGCACCGAGTCCAACACTGATGCTTCTGAAGAAAGCAACAATGCAACTACAGAGCAAAGTAGTGAAAATACTGATGAAAACTCGAGTGAACCAGAAGCAGCAGAAGAAGCCCCAGAAATCAAGCTTGAGACGGCTCCTGCTGATTTCCGCTTCCCAACTACAAATCAAACAAGGCACTGCTTTACTCGATATGTTGAGTATCACCGATGCATAGCTGCAAAAGGAGAAGGTGCCCCAGAATGTGACAAGTTTGCAAAATATTACCGTTCTCTTTGCCCTGGAGAATGGATTGACAGATGGAATGAGCAGAGGGAGAACGGAACATTCCCGGGTCCTCTGTAG 735 0.4925 MLGRVCASGLGDWYVGLSNPGPIPQLIPFPRLPLLLVLAASSLTSSPRVVPPSSMAEATAEKSSTLAEQYFVKEKEEKTETGTNPVEVKEVEVPKETTSLEAVAEKVVEAATAVASAVTEESGEVAPAAEESTESNTDASEESNNATTEQSSENTDENSSEPEAAEEAPEIKLETAPADFRFPTTNQTRHCFTRYVEYHRCIAAKGEGAPECDKFAKYYRSLCPGEWIDRWNEQRENGTFPGPL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0365 244 MobiDBLite consensus disorder prediction 118 177 - -
Lele25g0365 244 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B 55 244 IPR003213 GO:0005739
Lele25g0365 244 FunFam Cytochrome c oxidase subunit 6B1 165 244 - -
Lele25g0365 244 Gene3D Cytochrome c oxidase, subunit VIb 167 244 IPR036549 GO:0005739|GO:0045277
Lele25g0365 244 Pfam Cytochrome oxidase c subunit VIb 181 240 IPR003213 GO:0005739
Lele25g0365 244 SUPERFAMILY Cytochrome c oxidase subunit h 170 243 IPR036549 GO:0005739|GO:0045277
Lele25g0365 244 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 188 231 - -
Lele25g0365 244 MobiDBLite consensus disorder prediction 129 158 - -
Lele25g0365 244 CDD Cyt_c_Oxidase_VIb 171 243 IPR003213 GO:0005739
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0365 Lele-ChrLele25 2232482 2235162 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0365 25 2232482 2235162 Lele27g1719 27 22492906 22495651 hybridization
Lele25g0365 25 2232482 2235162 Lele28g0379 28 2316843 2320415 hybridization