Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1452 ATGAGGAATCATCCCCGACAGAAGGTCCACTACTGTTTCGAAAGCCATGCCCTAAATTCATTTTCACAATGCGTGTTGTTCTTCTCCAAGAATCTCTCCGTTTTCTCTATTATATACAGATTTTGTGTTGGGTCTGTTCTTGACGCTATTGAGCCGAGGCTTGTCTTATTCAGAGCTATGGACGACTGTAAATCGGTAGAGCGTGATTTTGCTTTCAGAGTTTCAAAGGAGAGCCCTCGAAGTCGCCGATCTCTGGCTTTGCCATTCTCTCCATTCACGATCATGGATGGCATTTTCTCCCGGAAGAGTTTTTCGTATCGCAAACTTCCTTCCGAGCCTCTCAAGCTCTCCGTCCTCAAATTGGACGGCTCTTGTTTCGATATTGTGGTTACAAAGACGGCCACTATCGCAGAACTTAGGCAGGCTGTGGAGGCAGTTTTCAGTCACATGCCTAAGAAGGGACCAGGGAAAATTTCATGGCCGCATGTTTGGGGGCAATTTTGCTTATGCTATGGTGGACAGAAGCTAGTTACAGAAACAGATTATCTTAAAAACTATGGCATCAAGGATGGTGACCAGCTTCGTTTCAACCGACATGTCTCAAATAGTTGCAATGTGAGAAGGAGGAGATTCAAGAAACGTATTGTTAGTTCAAAACAAAAAAGGGGGTCTTCATCAAAAGTAAGCAGCTATCAGCAGAAAGTTCACGATGGCAGTGGCAGTGACAGTGATGATGAAATTGGTTTGAATAGCACAGTGATAGAGAAGGGGAATATTCAGCATTTCAATAATGATGATGGCATTAAGAATCTTGAAAACAAGCTAACAAGCTTCTTGGGAGGGTTATTAACATGCACACGACTTGCAGTCATGAGAAGAAATAGAACGGAAGGCAAGATTTGTCCCCCGAGGCTTGCTCGAGGCTTATTGGGCAGTTTTAGGAAGATGAGCTTTTACGGGAGAAAGCGATTTTATCGAAAACATGCGAGGATTGGTTGGTACTGA 1005 0.4378 MRNHPRQKVHYCFESHALNSFSQCVLFFSKNLSVFSIIYRFCVGSVLDAIEPRLVLFRAMDDCKSVERDFAFRVSKESPRSRRSLALPFSPFTIMDGIFSRKSFSYRKLPSEPLKLSVLKLDGSCFDIVVTKTATIAELRQAVEAVFSHMPKKGPGKISWPHVWGQFCLCYGGQKLVTETDYLKNYGIKDGDQLRFNRHVSNSCNVRRRRFKKRIVSSKQKRGSSSKVSSYQQKVHDGSGSDSDDEIGLNSTVIEKGNIQHFNNDDGIKNLENKLTSFLGGLLTCTRLAVMRRNRTEGKICPPRLARGLLGSFRKMSFYGRKRFYRKHARIGWY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1452 334 CDD Ubl_SNRNP25 114 199 IPR040610 -
Lele27g1452 334 MobiDBLite consensus disorder prediction 214 247 - -
Lele27g1452 334 Pfam Ubiquitin-like domain 114 200 IPR040610 -
Lele27g1452 334 Gene3D - 109 206 - -
Lele27g1452 334 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 74 321 IPR039690 GO:0000398|GO:0005689
Lele27g1452 334 SUPERFAMILY Ubiquitin-like 110 203 IPR029071 -
Lele27g1452 334 MobiDBLite consensus disorder prediction 221 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1452 Lele-ChrLele27 20680162 20682620 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0656 01 3836906 3840120 Lele27g1452 27 20680162 20682620 CCT
Lele02g0644 02 3847885 3852930 Lele27g1452 27 20680162 20682620 CCT
Lele03g0656 03 3842611 3843233 Lele27g1452 27 20680162 20682620 CCT
Lele04g0662 04 3996952 4001477 Lele27g1452 27 20680162 20682620 CCT
Lele25g0634 25 3999303 4008222 Lele27g1452 27 20680162 20682620 hybridization
Lele26g0648 26 4117136 4120503 Lele27g1452 27 20680162 20682620 hybridization