Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0648 ATGGACGATTGTAAATTGGTAGAGCGTGATTTTGCTTTAAGAGTTTCAAAGGAGAGCCCTCGTAGTCGCCGATCTCTGGCTTTGCCATTCTCTCCATTCACGATCATGGATGGCATTTTCTCCCGAAAGAGTTTTTCGTATCGTAAACTTCCTTCCGATCCTCTCAGGCTCTCCGTTCTCAAATTGGACGGCTCTTGCTTCGATATTGTAGTCACAAAGACGGCCACTATCGCAGAACTTAGGCAAGCAGTGGAGGCAGTTTTCAGTCACATGCCTAAGAAGGGACCAGGGAAAATTTCATGGCCGCATGTTTGGGGGCAATTTTGCTTATGCTATGATGGACAGAAGCTAGTTACAGAAACAGATTATCTTAAAAACTATGGCATCAAGGATGGTGACCAGCTTCGTTTCATCCGACATGTCTCAAATAGTTGCAATGTGAGAAGGAGGAGATTCAAGAAACGTATTGTTAGTTCAAAACAAAAAAGAGGGTCTTCATCAAAAGTAAGTAGCTATCAGCAGAAAGATCACGATGGCAGTGACAGTGATGATGAAATTGGTTTGGATAGCATAGTGATAGAGAAGGGGAATATTCAGCATTTCAATAATGATGATCGCGTTAAGAATCTTGAAAACAAGCTAACAAGCTTCTGGGGAGGGTTATTAACATGCACACGACTTGCAGTCATGAGAAGAAATAGAAGCGAAGGCAGGATTTGTCCCCTGAGGCTTGCTCGAGGCTTACTGGGCAGTTTTAGGAAGATAAGCTTTTACAGGAAAAAGCGATTTTATCGGAAACAATCGGGGATTGGGTGGTGTTGA 822 0.4307 MDDCKLVERDFALRVSKESPRSRRSLALPFSPFTIMDGIFSRKSFSYRKLPSDPLRLSVLKLDGSCFDIVVTKTATIAELRQAVEAVFSHMPKKGPGKISWPHVWGQFCLCYDGQKLVTETDYLKNYGIKDGDQLRFIRHVSNSCNVRRRRFKKRIVSSKQKRGSSSKVSSYQQKDHDGSDSDDEIGLDSIVIEKGNIQHFNNDDRVKNLENKLTSFWGGLLTCTRLAVMRRNRSEGRICPLRLARGLLGSFRKISFYRKKRFYRKQSGIGWC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0648 273 Pfam Ubiquitin-like domain 55 141 IPR040610 -
Lele26g0648 273 Gene3D - 51 147 - -
Lele26g0648 273 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 16 261 IPR039690 GO:0000398|GO:0005689
Lele26g0648 273 MobiDBLite consensus disorder prediction 155 184 - -
Lele26g0648 273 SUPERFAMILY Ubiquitin-like 51 144 IPR029071 -
Lele26g0648 273 CDD Ubl_SNRNP25 55 140 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0648 Lele-ChrLele26 4117136 4120503 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0656 01 3836906 3840120 Lele26g0648 26 4117136 4120503 CCT
Lele02g0644 02 3847885 3852930 Lele26g0648 26 4117136 4120503 CCT
Lele03g0656 03 3842611 3843233 Lele26g0648 26 4117136 4120503 CCT
Lele04g0662 04 3996952 4001477 Lele26g0648 26 4117136 4120503 CCT
Lele26g0648 26 4117136 4120503 Lele27g1452 27 20680162 20682620 hybridization
Lele26g0648 26 4117136 4120503 Lele28g0631 28 4021626 4028849 hybridization