Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0233 ATGTTTCTGAAGAATCTGAACAGAGCTGAGAAAAAGTGCCAGTCGCTAACGACCATTGCCTCCATTCCCTCACTTCTGTATTTTCCGCCTCTTTCATCATCTGCTCTGTCTTTATCTATTTTCTTCCGTCTCTCAGTTGTTTCTCCTTGCAAAGGGTTCTCATTCTGGAAAGAAGGAAATACGGTATGGGTACTTAGAAACAAGAAAGTGAGGAGATTGGAGGACGGTGTGGTTCGGATTGGCTGTCAAATGGTGGGAAAGGAGAACCTGAGGATCGAGGACTTGAACTTGTGCTTTGAGAAGCTGATGATGGTTGCCGGCGGCGAAAAAGGTGGTAAAGGAGTGAAAATGGAGGGTGGGGCGGCGAATTCAGAATGGAAAGATATTCCTGTGGAACTTTTGATGCAAATATTGGGCCTTGTGGATGATCAGACGATGATCGCAGCTTCTGTTGTCTGTCGTGGGTGGAGAGAAGCTGTTTGCTTTGGCCTTACCCGTTTATCACTCTCATGGTGCAACAAGAACATGAATAATTTGGTCCTATTTCTTGCTCCCAAATTCACAAAATTGCAAACTCTCATTCTACGTCAAGCTAAGCCTCAGCTGGAGGATACCGCCGTTGAGACCATTGCAACTTGCTGTCATGACCTGCAGGTCCTGGACCTGAGCAAAAGTTTCAAGCTGACCGATCGTTCACTGTATGCCTTGGCCCATGGTTGCCCTAATCTCACAAAACTGAATATCAGTGGGTGTTCAGCATTTAGTGACACCAGTCTGGCATACCTGGCCAGTTTCTGCAGAAAATTGAGAGGCTTAAATCTCTGTGGATGTGTGAAAGCTGCATCCGACACCGCATTGCAGGCAATTGGACGCTACTGCAATGAGTTGCAGTGTTTGAACCTGGGATGGTGCGAAAATGTGGGTGATGTTGGAGTGATGAGCTTAGCTCACGGGTGCCCTGATCTCAGAACACTGGACTTGTGTGGTTGTATCTGTATAACAGATGATAGTGTGATTGCAATGGCAAACGGGTGCCCTCATCTGAGGTCACTGGGGCTGTACTACTGCCAAAACATCACAGACAAGTCAATGCATTCGTTGGCTCAGAGCAAAGTGAATATGAAAGGAGGAAACGAGGAGGATGGGCTGAGGACTCTGAACATAAGCCAATGCACAGCTCTCACGCCCTCGGCGGTTCAGGCAGTGTGTGACTCCTTCCCGGCTCTGCACACATGCTCCGGCCGGCACTCCCTCATCATGAGTGGCTGTCTCAACTTGACCTCCGTCCACTGTGCCTGTGCCGGCCACGCTCATCGTGTCCTCACCGCTTTTCCTCATCCAGCACACTGA 1350 0.4889 MFLKNLNRAEKKCQSLTTIASIPSLLYFPPLSSSALSLSIFFRLSVVSPCKGFSFWKEGNTVWVLRNKKVRRLEDGVVRIGCQMVGKENLRIEDLNLCFEKLMMVAGGEKGGKGVKMEGGAANSEWKDIPVELLMQILGLVDDQTMIAASVVCRGWREAVCFGLTRLSLSWCNKNMNNLVLFLAPKFTKLQTLILRQAKPQLEDTAVETIATCCHDLQVLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDTSLAYLASFCRKLRGLNLCGCVKAASDTALQAIGRYCNELQCLNLGWCENVGDVGVMSLAHGCPDLRTLDLCGCICITDDSVIAMANGCPHLRSLGLYYCQNITDKSMHSLAQSKVNMKGGNEEDGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLNLTSVHCACAGHAHRVLTAFPHPAH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0233 449 Gene3D Ribonuclease Inhibitor 159 382 IPR032675 -
Lele26g0233 449 Pfam F-box-like 127 160 IPR001810 GO:0005515
Lele26g0233 449 Gene3D - 125 158 - -
Lele26g0233 449 SMART LRR_CC_2 345 370 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 214 239 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 266 292 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 240 265 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 187 213 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 319 344 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 293 318 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 380 405 IPR006553 -
Lele26g0233 449 SMART LRR_CC_2 161 186 IPR006553 -
Lele26g0233 449 Pfam Leucine Rich repeat 293 316 IPR001611 GO:0005515
Lele26g0233 449 Pfam Leucine Rich repeat 345 368 IPR001611 GO:0005515
Lele26g0233 449 Pfam Leucine Rich repeat 240 262 IPR001611 GO:0005515
Lele26g0233 449 PANTHER UNCHARACTERIZED 307 430 - -
Lele26g0233 449 SUPERFAMILY F-box domain 118 161 IPR036047 GO:0005515
Lele26g0233 449 SUPERFAMILY RNI-like 160 430 - -
Lele26g0233 449 FunFam F-box protein SKP2B 161 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0233 Lele-ChrLele26 1350060 1355688 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0233 26 1350060 1355688 Lele01g0254 01 1443459 1449802 CCT
Lele26g0233 26 1350060 1355688 Lele02g0245 02 1396053 1399266 CCT
Lele26g0233 26 1350060 1355688 Lele03g0260 03 1427040 1432743 CCT
Lele26g0233 26 1350060 1355688 Lele04g0251 04 1497699 1500763 CCT
Lele26g0233 26 1350060 1355688 Lele28g0239 28 1408494 1410614 hybridization