Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0245 ATGGCTAGAGTTTGCTGGCCATATTTTGATCCTGCGTATGAGAACTTCAGCAACAGAATCAATCCTCCAAGGTTTGCTGTTACTTCCTTTGACATGCTATTTTACACTGAGCTGCACATTGAAAAGCCTCTTCAGGATGGAGTATTAGAGGAAAAGGACCCAAAATCGTACGTATATCTTTATCCTCAGGGTCTCTGGATAATGCTAGTTGCCATGATTGTTGATAGTGTTAACAAGCCTGGAATTCTGCTGGAACTGGTGCAAATTCTAACAGACCTTGACTTCATAATCACCAAGGCTTACATATCTTCAGATGGTGGATGGTTTATGGATGTTTTTCATGTGACGGATCAGCAAGGAAAGAAGATAACCGACATCAAAACCATCGACTTCATAGGAAAGGCTCTAGGACCCAAGGGCCAGAGCAAAGAAGGAGAAAAGAGTTGGCCTGCCAAAGGGGTTGGGGTGCACTCCATTGGTGATCACACAGCTATTGAGCTCATAGGCAGAGACCGCCCAGGTCTTCTATCTGAGATCTCAGCTGTCCTTGCCAATCTCCAATTTAATGTGATTTCGGCTGAAGTTTGGACTCATAATAGACGCATAGCATGTGTTCTTTATGTCAACGATGCTACCACCGGTGCTGTCGATACCCCGAACAAGCTATCTCTTACGGAGGAGCAGCTCAAACACATAGTACGTGGATGTGAGGATGATGAGAAAGTGGCTCACACCAGTTTCTCTATGGGTTTCACCCACATGGATCGGAGACTCCACCAAATGTTGTTTGTTGATCGGGGCTATGAATGTACCGGAGTAACGGCTCAGATGGATTATCCTCCTTGTTTTAGGCCCAAAATAACAATAGAACGTTGTGAGGAAAAAGGGTATTCGGTGGTTAGTGTCAGTTGTAGAGATCGGGCAAAACTGATGTGTGCCATTGTCTGCACTCTTACTGACATGCAATATGTTGTTTTTCATGCCAAAATCTCATCGGATGGCCCTTACGCATCCCAGTACTTCATTCGGCACATGGATAGATGTACGCTTGATACTGAAGCAGAGGAAGAAAGGGTCATTAAATGCATTCAAGCTGCTATACAAAGAAGAGTAAGCGAGCTATCTACTTGTATTGTTGCAATGGTACGGCAGATGCATGGGGCTAGGAACACAAAAGGTTTTAGCATTGATTCAGTGAGGGCAGCGGTATTCACCATTGGAGAGCAAGGACTGTATGTGTCCTACGCGAGAGACGTTTCTGGAAACCCAGTGGACATGAAGATCGTGGAAGCACTTTGGAAAGAGATTGGGGCAGAGTATGATGGCGATGGTGATGGTGAAGGTGAAGAGAGTAGCAAGAAATGCGGCGGATGGTCGTGA 1380 0.4529 MARVCWPYFDPAYENFSNRINPPRFAVTSFDMLFYTELHIEKPLQDGVLEEKDPKSYVYLYPQGLWIMLVAMIVDSVNKPGILLELVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDIKTIDFIGKALGPKGQSKEGEKSWPAKGVGVHSIGDHTAIELIGRDRPGLLSEISAVLANLQFNVISAEVWTHNRRIACVLYVNDATTGAVDTPNKLSLTEEQLKHIVRGCEDDEKVAHTSFSMGFTHMDRRLHQMLFVDRGYECTGVTAQMDYPPCFRPKITIERCEEKGYSVVSVSCRDRAKLMCAIVCTLTDMQYVVFHAKISSDGPYASQYFIRHMDRCTLDTEAEEERVIKCIQAAIQRRVSELSTCIVAMVRQMHGARNTKGFSIDSVRAAVFTIGEQGLYVSYARDVSGNPVDMKIVEALWKEIGAEYDGDGDGEGEESSKKCGGWS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0245 459 MobiDBLite consensus disorder prediction 440 459 - -
Lele02g0245 459 Gene3D - 162 243 - -
Lele02g0245 459 CDD ACT_ACR_3 297 370 - -
Lele02g0245 459 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 74 438 IPR040217 -
Lele02g0245 459 Pfam ACT domain 164 208 IPR002912 -
Lele02g0245 459 ProSiteProfiles ACT domain profile. 71 150 IPR002912 -
Lele02g0245 459 SUPERFAMILY ACT-like 159 233 IPR045865 -
Lele02g0245 459 SUPERFAMILY ACT-like 71 133 IPR045865 -
Lele02g0245 459 ProSiteProfiles ACT domain profile. 164 241 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0245 Lele-ChrLele02 1396053 1399266 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0233 26 1350060 1355688 Lele02g0245 02 1396053 1399266 CCT
Lele28g0239 28 1408494 1410614 Lele02g0245 02 1396053 1399266 CCT
Lele02g0245 02 1396053 1399266 Lele02g0245 02 1396053 1399266 ECH
Lele02g0245 02 1396053 1399266 Lele03g0260 03 1427040 1432743 hybridization
Lele02g0245 02 1396053 1399266 Lele04g0251 04 1497699 1500763 hybridization