Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0251 ATGGAGAGCCCTCCTTCCACGTCTTATGTCATACTTGCGTGTGATGCCACCAAAGATAGCACTGAGCATGAGATCAAGTCCATTCTTGGTCACGTGCGAAGTACCAGTGGCATTTTATATGCAGGTTACAAATTGCTACTGCTCGCCGTCCTGCATAAGGTGCCACACCCCATGGGGTACCAGACATTACCATGCCCTGAGTCTTTTGCTGGCACGAATTTCCGTGCAATGGATGAAGTAGTTGGCAAGGAACTTGATTCATATGCAAATATGCTTTTGCCCATGTATGAAGATTGGGAAAATGCAGGGGTTATATTGCAAGAGGTTGCATGCTATAATGCAGCTTGGATTGTACTTGGTAGTGTTAACACGCCTGGAATTCTGCTGGAACTGGTGCAAATTCTAACAGACCTTGACTTCATAATCACCAAGGCTTACATATCTTCTGATGGTGGAAGGTTTATGGATGTTTTTCATGTGACGGATCAGCAAGGAAAGAAGATAACAGACATCAAAACCATCGACTTCATAGGAAAGGCTCTAGGACCCAAGGGCCAGAGCAAAGAAGGTGAAAAGAGTTGGCCTGCCACAGGGGTTGGGGTGCACTCCATTGGTGATCACACAGCTATTGAGCTCATAGGCAGAGACCGCCCAGTCTTCTATCTGAGATCTCAGCTGTCCTTGCCAATCTCCAATTTAAGGAGCAGCTCAAACACATATTACGTGGATGTGAGGATGATGAGAAAGTGGCTCACACCAGTTTCTCTATGGGTTTCACCCACATGGATCGGAGACTCCACCAAATGTTGTTTGCTGATCTGGGACTATGAATGTACCGGAGTAACGGCTCAGAGGGATTATCCTCCTTGTTTTAGGCCCAAAATAACAATAGAACGTTGTGAGGAAAAAGGGTATTCGGTGGAGTACTTCATTCGGCACATGGATGGATGTACGCTTGATACTGAAGCAGGGGAAGAAAGGGTCATTAAATGCATTGAAGCTGCTATACAAAGAAGAGTAAGCGAGCTATCTACTTGTATTGTTGCAATGGTACGGCAGATACATGGGGCTAGGAACACGAAAGGTTTTAGCATTGATTCAGTGAGGGCAGCGGTATTCACCATTGGAGAGCAAGGACTGAATGTGTTCTACGCGAGAGACGTTTCTGGAAACCCAGTGGACATGAAGATCGTGGGAGCACTTCGGAAAGAGATTGGGCAGAGCATGATGGTGATGGTGATGGTGAAGAGAGTAGCAAGCAATGCGGCAGAGGCGCGTGAGGGCAGAGGAGGGGCCAAAAGAGGTTTCTTCTTTGGGAACTTGCTGCTGGGAAGGTTCTTGTCCTGA 1347 0.4692 MESPPSTSYVILACDATKDSTEHEIKSILGHVRSTSGILYAGYKLLLLAVLHKVPHPMGYQTLPCPESFAGTNFRAMDEVVGKELDSYANMLLPMYEDWENAGVILQEVACYNAAWIVLGSVNTPGILLELVQILTDLDFIITKAYISSDGGRFMDVFHVTDQQGKKITDIKTIDFIGKALGPKGQSKEGEKSWPATGVGVHSIGDHTAIELIGRDRPVFYLRSQLSLPISNLRSSSNTYYVDVRMMRKWLTPVSLWVSPTWIGDSTKCCLLIWDYECTGVTAQRDYPPCFRPKITIERCEEKGYSVEYFIRHMDGCTLDTEAGEERVIKCIEAAIQRRVSELSTCIVAMVRQIHGARNTKGFSIDSVRAAVFTIGEQGLNVFYARDVSGNPVDMKIVGALRKEIGQSMMVMVMVKRVASNAAEAREGRGGAKRGFFFGNLLLGRFLS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0251 448 ProSiteProfiles ACT domain profile. 116 195 IPR002912 -
Lele04g0251 448 SUPERFAMILY ACT-like 115 178 IPR045865 -
Lele04g0251 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 305 412 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0251 Lele-ChrLele04 1497699 1500763 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0233 26 1350060 1355688 Lele04g0251 04 1497699 1500763 CCT
Lele28g0239 28 1408494 1410614 Lele04g0251 04 1497699 1500763 CCT
Lele04g0251 04 1497699 1500763 Lele04g0251 04 1497699 1500763 ECH
Lele01g0254 01 1443459 1449802 Lele04g0251 04 1497699 1500763 hybridization
Lele02g0245 02 1396053 1399266 Lele04g0251 04 1497699 1500763 hybridization