Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0551 ATGCAACCCCGGCAGAGATCAAGAATTGATTTGGCTGAATTGAAGGCACAAATGATAAAGAAGGTTGGAGTTGACAAGTTTAAGCGGTACTTTTACTACTTGGAAAGGTTTATCAGTAACAAGATGGGCAAGCCTCAATTCGACAACTTTTGTAGTCGGATACTTGGGAGGGAGAATGTTCCATTGCACAATCACCTTTTCAGATCAATGCTGATGAATGCATGCCGAGCCAAGACCCCACCACCAATCCAACCATCTGATCCCCCAAGGTTTGGAACACATGTTACCAACATATCTCCTGGTAGAGACGATGGGCATGAATCAAATGGTGTCACTCTACAGAATCACAATCAAAATGCACCCATTTGGTCAAATGGTGTTTTACCAGCATCACCACGTAAGATAAGGACTGGAATACGTGAGCGGAAGCATAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTCCCTCATCAATCTCTAGGTGCAGCAGACAGTGGTAGTAAGGGTGATACGGAGAATGGGACTCTCACTCCATACGATTATCAAAGACCAGTACAACTTCAAGCTGTTGCTGAGTTACCTGAAGATGAAAGAGGAGATGCTGTTCGGCAACCTGCTAATAAACCAAGAATACATGGAAAAGGGGTGACTGAAGCTTTAATTGAAGATGCGGAAGAAGTGGAGCAGTCAAGCTACTTAAATTTCTCTAGGAGCCCCCTGCTAGCTCCACTGGGGATTCCATACTGCCCAGCAAGTGTGGGTGGGTCCCGGAAAGCTTTACCAGTGGCTAGCACTGGTGATTTTGTTAGTTGTTATGATAGTGGTAGGTTGTCTGACGTTGATACTTTGAGAAGGCGCATGGAGCAGATTGCTGCAGTACAGGGTCTTGGGGGTGTCTCTATGGAATGCGCCCATATGTTGAACAATGTGTTGGATGTTTACCTGAAGCGGTTGATCACATCCTGTGTTAATTTAGTGGGGGTTAGGTCTACGAATGAGCTGAGAAAGCCCCCTGTTCAGAAACAGCAGGTTCGGGGCAAGGTAATCAATGGTATGTGGTCAAGTAATCATTTACATGTGGCGAGTGCTGGTGGAGCATCAGAAGCTGTTCCTGAACATGTACCACCACTGCCATGCTCTGTATCTTTGCTTGATTTCAGAGCTGCCATGGAGCTGAATCCGCAGCAACTTGGAGAAGATTGGTCATTGCTATTGGAGAAGATTTCTATGCATGCATCCGAGGAATAG 1263 0.4592 MQPRQRSRIDLAELKAQMIKKVGVDKFKRYFYYLERFISNKMGKPQFDNFCSRILGRENVPLHNHLFRSMLMNACRAKTPPPIQPSDPPRFGTHVTNISPGRDDGHESNGVTLQNHNQNAPIWSNGVLPASPRKIRTGIRERKHRDRPSPLGPNGKVDSVPHQSLGAADSGSKGDTENGTLTPYDYQRPVQLQAVAELPEDERGDAVRQPANKPRIHGKGVTEALIEDAEEVEQSSYLNFSRSPLLAPLGIPYCPASVGGSRKALPVASTGDFVSCYDSGRLSDVDTLRRRMEQIAAVQGLGGVSMECAHMLNNVLDVYLKRLITSCVNLVGVRSTNELRKPPVQKQQVRGKVINGMWSSNHLHVASAGGASEAVPEHVPPLPCSVSLLDFRAAMELNPQQLGEDWSLLLEKISMHASEE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0551 420 MobiDBLite consensus disorder prediction 81 187 - -
Lele25g0551 420 MobiDBLite consensus disorder prediction 165 187 - -
Lele25g0551 420 MobiDBLite consensus disorder prediction 108 125 - -
Lele25g0551 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 5 331 IPR024738 GO:0070461
Lele25g0551 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 419 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0551 Lele-ChrLele25 3495472 3496734 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0551 25 3495472 3496734 Lele01g0573 01 3380568 3384047 CCT
Lele25g0551 25 3495472 3496734 Lele02g0567 02 3405704 3406957 CCT
Lele25g0551 25 3495472 3496734 Lele03g0578 03 3416954 3418207 CCT
Lele25g0551 25 3495472 3496734 Lele04g0586 04 3544331 3545587 CCT
Lele25g0551 25 3495472 3496734 Lele27g1527 27 21200717 21201979 hybridization
Lele25g0551 25 3495472 3496734 Lele28g0556 28 3533321 3539062 hybridization