Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0556 ATGCCTGTTGAAGGGAGGTACTCTTCTATTTTGCCTCCCAATAACCTCTTTATAATTTTTTTTTTCACTCCACTTCTCTTTTCTTTTTTCCCCCTATTTATTATTAACTTCGCATTCAAACTTCACCATGATGTAGTGATTCAATGTCCGTCTTGTGATGTTCGAAAGAAGCAAGGTGTTTCCAACCCTGGGTTGGTGATTCAAACTCAAGAAATGCAACCCCGGCAGAGCTCAAGAATTGATTTGGCTGAATTGAAGGCACAAATGATAAAGAAGGTTGGAGTTGACAAGTTTAAGCGGTACTTTTACTACTTGGAAAGGTTTCTTAGTCACAAGATGAGCAAGCCTCAATTCGACAACTTCTGTAGTCGGATACTTGGGAGGGAGAATGTTCCATTGCACAATCACCTTTTCAGATCAATGCTGATGAATGCATGCGGAGCCAAGACCCCACCACCAATCCAACCACCTGGTCCCCCAAGGTTTGGAACACATGTTACCAACATATCTCCTGGTAGAGAAGACGGGCATGAATCAAATGGTGTCACTTTACAGAACCACAATCAAAATTCACCCATTTGGTCAAATGGTGTTTTACCAGCTTCGCCTCGTAAGATAAGAACTGGAATACGTGAGCGGAAGCATAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTCCCTCATAAATCACTTGGTACAGAAGACAGTGGTAGTAAGGGTGATATGGAGAACGGGAATCTCACTCCATGTGATTATCAAAGACCAGTACAACTTCAAGCTGTTGCCGAGTTGCCTGAAGATGAAAGAGGAGATGCTGTTCTGCAACCTGCTAATAAACCAAGAATACATGGAAAAGGGGTGACTGAAGCTTTAATTGAAGATGGGGAAGAAGTGGAGCAGTCAAGCTACTTAAGTTTCTCTAGGAGCCCCCTGCTAGCTCCACTAGGGATTCCATACTGCCCAGCAAGTGTGGGTGGGGCCCGCAAAGCTTTACCAGTGGCTAGCACTGGTGATTTTGTTAGTTGTTATGATAGTGGTAGGTTGTCTGACACTGATACTTTGAGAAGACACATGGAACAGATTGCCGCAGTACAGGGTCTTGGGGGTGTCTCTATGGAATGTGCCCATATGTTGAATAATGTGTTAGATGTTTACCTGAAGCGGTTGATCACATCCTGTGTTAATTTAGTGGGGGCTAGGTCTACTAATGAGCTGAAGAAGCCCCCTGTTCAGAAACAGCAGGTTCGGGGTAAGGTAGTCAATGGTATGTGGTCAAGTAATCATTTACATGTGCCGAGTGCTGGTGGAGCATCAGAAGCTGTTCCTGAACACGTACTGCCACTGCCATGCTCAGTATCTTTGCTTGATTTCAGAGCTGCTATGGAGTTGAATCGGCAGCAACTTGGAGAAGATTGGCCATTGCTATTGGAGAAGATTTCTATGCATGCATTTGAGGAATAG 1476 0.4431 MPVEGRYSSILPPNNLFIIFFFTPLLFSFFPLFIINFAFKLHHDVVIQCPSCDVRKKQGVSNPGLVIQTQEMQPRQSSRIDLAELKAQMIKKVGVDKFKRYFYYLERFLSHKMSKPQFDNFCSRILGRENVPLHNHLFRSMLMNACGAKTPPPIQPPGPPRFGTHVTNISPGREDGHESNGVTLQNHNQNSPIWSNGVLPASPRKIRTGIRERKHRDRPSPLGPNGKVDSVPHKSLGTEDSGSKGDMENGNLTPCDYQRPVQLQAVAELPEDERGDAVLQPANKPRIHGKGVTEALIEDGEEVEQSSYLSFSRSPLLAPLGIPYCPASVGGARKALPVASTGDFVSCYDSGRLSDTDTLRRHMEQIAAVQGLGGVSMECAHMLNNVLDVYLKRLITSCVNLVGARSTNELKKPPVQKQQVRGKVVNGMWSSNHLHVPSAGGASEAVPEHVLPLPCSVSLLDFRAAMELNRQQLGEDWPLLLEKISMHAFEE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0556 491 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 76 402 IPR024738 GO:0070461
Lele28g0556 491 MobiDBLite consensus disorder prediction 165 255 - -
Lele28g0556 491 MobiDBLite consensus disorder prediction 179 197 - -
Lele28g0556 491 PANTHER TRANSCRIPTIONAL ADAPTER 1 72 490 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0556 Lele-ChrLele28 3533321 3539062 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0551 25 3495472 3496734 Lele28g0556 28 3533321 3539062 hybridization
Lele26g0567 26 3598440 3599702 Lele28g0556 28 3533321 3539062 hybridization