Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1527 ATGCAACCCCGGCAGAGCTCAAGAATTGATTTGGCTGAATTGAAGGCACAAATGATAAAGAAGGTTGGAGTTGACAAGTTTAAGCGGTACTTTTACTACTTGGAAAGGTTTATCAGTCACAAGATGAGCAAGCCTCAATTCGACAAATTTTGTAGTCGGATACTTGGGAGGGAGAATGTTCCATTGCACAATCACCTTTTCAGATCAATGCTGATGAATGCATGCCGAGCCAAGACCCCACCACCAATCCAACCATCTGGTCCCCCAAGGTTTGGAACACATGTTACCAACATATCTCCCGGTAGAGAAGATGGGCATGAATCAAATGGTGTCACTCTACAGAATCACAATCAAAATGCACCCATTTGGTCAAACGGGGTTTTACCGGCATCACCACGTAAGATAAGGACTGGAATACGTGAGCGGAAGCATAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTCTCTTATCAATCTCTAGGTTTAGAAGACAGTGGTAGTAAGGTTGATATGGAGAATGGGACTCTCACTCCATGCGATTATCAAAGACCAGTACAACTTCAAGCTGTTGCTGAGTTACCTGAAGATGAAAGAGGAGATGCTGTTCAGCAACCTGCTAATAAACCAAGAATACATGTAAAAGGGGTGACTGAAGCTTTAATTGAAGATGGGGAAGAAGTGGAGCAGTCAAGCTACTTAAATTTCTCTAGGAGTCCCCTGCTAGCTCCACTGGGGATTCCATACTGCCCAGCAAGTGTGGGTGGGGCCCGCAAAGCTTTACCAGTGGCTAGCACTGGTGATTTTGTTAGTTGTTATGATAGTGGTAGGTTGTCTGACACTGATACTTTGAGAAGGCGCATGGAGCAGATTGCTGCAGTACAGGGTCTTGGGGGCGTCTCTATGGAATGCGCCCATATGTTGAATAATGTGTTGGATGTTTACCTGAAGCGGTTGATCACATCCTGTGTTAATTTAGTGGGGGCTAGGTCTACGAATGAGCTGAGAAAGCCCCCTGTTCAGAAACAGCAGGTTCGGGGCAAGGCAATCAATGGTATGTGGTCAAGTAATCATTTACATGTGGCAAGTGCTGGTGGAGCATCAGAAGCTGTTCCTGAACATGTACCGCCACTGCCATGCTCTGTATCTTTGCTTGATTTCAGAGCTGCCATGGAGCTGAATCCGCAGCAACTTGGAGAAGATTGGTCATTGCTATTGGAGAAGATTTCTATGCATGCATCCGAGGAATAG 1263 0.4576 MQPRQSSRIDLAELKAQMIKKVGVDKFKRYFYYLERFISHKMSKPQFDKFCSRILGRENVPLHNHLFRSMLMNACRAKTPPPIQPSGPPRFGTHVTNISPGREDGHESNGVTLQNHNQNAPIWSNGVLPASPRKIRTGIRERKHRDRPSPLGPNGKVDSVSYQSLGLEDSGSKVDMENGTLTPCDYQRPVQLQAVAELPEDERGDAVQQPANKPRIHVKGVTEALIEDGEEVEQSSYLNFSRSPLLAPLGIPYCPASVGGARKALPVASTGDFVSCYDSGRLSDTDTLRRRMEQIAAVQGLGGVSMECAHMLNNVLDVYLKRLITSCVNLVGARSTNELRKPPVQKQQVRGKAINGMWSSNHLHVASAGGASEAVPEHVPPLPCSVSLLDFRAAMELNPQQLGEDWSLLLEKISMHASEE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1527 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 5 331 IPR024738 GO:0070461
Lele27g1527 420 MobiDBLite consensus disorder prediction 99 161 - -
Lele27g1527 420 MobiDBLite consensus disorder prediction 108 125 - -
Lele27g1527 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 419 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1527 Lele-ChrLele27 21200717 21201979 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0551 25 3495472 3496734 Lele27g1527 27 21200717 21201979 hybridization
Lele26g0567 26 3598440 3599702 Lele27g1527 27 21200717 21201979 hybridization