Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0567 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAAATAAAAGCGCAAATTGTAAAGAGGATTGGTGGCGATAAGTCAAAACGGTACTTGTATTGCCTGAACAAGTTTTTGAGTCAGAAGCTGAGCAAGAATGATTTTGATAAGCTATGTTATCGGTTACTTGGGAGGGAGAATCTTCCACTACACAATCATTTTATGAGATCAGTTTTGAAAAATGCATGCCAAGCCAAGATGGCTTCTCCAATCCAGCCACCAGGCCCCTTGAAGTCTGGAACACTGGCAACAATATTTCCTGGTAGAGAGGATGGGCATGAACACAGTAGTTCTAGCTTCCAAAATCAAAGTCAAAATGCATCCATTTGGTCAAATGGGGTTTTACCAGTGTCCCCACGTAAGATGAGGTCTGGTATACGGGATCGGAAGAACAGGGATAGACCCAGTCCACTTGGACCAAATGGGAAGGTTGATTCCACTTCACATCAGTCCCTAGGTACAGAAGACAGTGGTAGTAAGGTTGACATGGAGAATGGGACTCTTACTCCATGTGATTATCAAAGACCAATACAGCAACTTCAAGCAGTTGCTGAGCTTCCTGACAATGAAAGGCGGGATGCAGTTGATCGTTCAGCTGAAAAACCAAGAATACATGGCAAAGGGACATCTGGGTTATCAGCTGTTGAAGATGGGGAAGAAGTGGAGCAGTCAACCCGCTTCTCCAGAAGTCCCCTGCTAGCACCACTCGGAATTCCTTACTGCCCAGCAAGTGAGGGTGGAGCACGCCGAGCCTTGCCTGTGGTTAGCACATGTGATTTTCTTAGCTGTCATGATAGTGGCTGGTTGTCTGATGCAGAAACACTGAGAAGGCGCATGGAGCAGATTGCTACAGTACAGGGTCTTGGAGGTGTTTCCGTGGAATGTGCTAATACGTTGAACAGTACGCTGGATGTGTATTTGAAACGTCTAATTAGGTCATGTGTTGGCTTAATGGAAGCTAGGTCTGCTAACGAACTGAGGAAGACCTCTTCCCAGAAACAGCAGATTCAGGGTAAGGTCATCAATGGCACGTGGCCAAGTAATAATTTACACATGCAGAGTGCAGGTGGGTCAACAGAACCTGTGCCTGATCGCAGACCACCATGCTCGGTATCTTTCTTAGATTTTAAAGTTGCCATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCAGTGCTGTTGGAGAAAATTTCTATGCACACGTTCAACGAATAA 1254 0.4577 MQPQQSSRIDLGEIKAQIVKRIGGDKSKRYLYCLNKFLSQKLSKNDFDKLCYRLLGRENLPLHNHFMRSVLKNACQAKMASPIQPPGPLKSGTLATIFPGREDGHEHSSSSFQNQSQNASIWSNGVLPVSPRKMRSGIRDRKNRDRPSPLGPNGKVDSTSHQSLGTEDSGSKVDMENGTLTPCDYQRPIQQLQAVAELPDNERRDAVDRSAEKPRIHGKGTSGLSAVEDGEEVEQSTRFSRSPLLAPLGIPYCPASEGGARRALPVVSTCDFLSCHDSGWLSDAETLRRRMEQIATVQGLGGVSVECANTLNSTLDVYLKRLIRSCVGLMEARSANELRKTSSQKQQIQGKVINGTWPSNNLHMQSAGGSTEPVPDRRPPCSVSFLDFKVAMELNPQQLGEDWPVLLEKISMHTFNE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0567 417 MobiDBLite consensus disorder prediction 81 179 - -
Lele02g0567 417 MobiDBLite consensus disorder prediction 198 216 - -
Lele02g0567 417 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 329 IPR024738 GO:0070461
Lele02g0567 417 MobiDBLite consensus disorder prediction 198 230 - -
Lele02g0567 417 MobiDBLite consensus disorder prediction 109 125 - -
Lele02g0567 417 MobiDBLite consensus disorder prediction 359 378 - -
Lele02g0567 417 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 415 IPR024738 GO:0070461
Lele02g0567 417 MobiDBLite consensus disorder prediction 134 148 - -
Lele02g0567 417 MobiDBLite consensus disorder prediction 153 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0567 Lele-ChrLele02 3405704 3406957 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0551 25 3495472 3496734 Lele02g0567 02 3405704 3406957 CCT
Lele02g0567 02 3405704 3406957 Lele03g0578 03 3416954 3418207 hybridization
Lele02g0567 02 3405704 3406957 Lele04g0586 04 3544331 3545587 hybridization