Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0578 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAAATAAAAGCGCAAATTGTAAAGAGGATTGGTGGCGATAAGTCAAAACGGTACTTCTATTGCCTGAACAAGTTTTTGAGTCAAAAGCTGAGCAAGAATGATTTTGATAAGCTATGTTATCGGTTACTTGGGAGGGAGAATCTTCCACTACACAATCATTTTATGAGATCAGTTTTGACGAATGTATGCCAAGCCAAGACATCTCCTCCAATCCAGCCATCAGGTCCCTTGAAGTCTGGAACACTTGCAACAACAATATCTCCTGGTAGAGAGGATGGGCATGAACACAGTAGTTCTAGCTTCCAAAATCAAAGTCAAAATGTATCCATTTGGTCAAATGGGGTTTTACCAGTGTCCCCACGTAAGCTGAGGTCTGGCATACGTGATCGGAAGAACAGGGATAGACCCAGTCCACTTGGACCAAATGGGAAGGTTGATTCCGCATCACTCCAGTCCCTAGGTACAGAAGACAGTGGTAGTAAGGTTGACATGGAGAATGGTACGCTTACTCCATGTGATTATCAAAGACCAATACAGCAACTTCAAGCGGTTGCTGAGCTGCCTGACAATGAAAGGCGGGATGCGGTCGAGTGTTCAGCTGAAAAACCAAGAATACATGGCAAAGGGCCAACCGGGTTATCAGCTGTTGAAGATGGCGAAGAAGTGGAGCAGTCAACACGCTTCTCCAGAAGTCCCCTGCTAGCACCACTTGGAATTCCGTACTGCCCAGCAAGTGAGGGTGGAGCGGGCAGAGCCTTGCCTGTGGTTAGCACGGGTGATTTTCTTAGTTGTTATGACAGTGGCTGGTTGTCTGATGCAGAAACACTGAGAAGGCGCATGGAGCAGATTGCTACAGTACAGGGTCTTGGAGGTGTTTCCACGGAATGTGCTAATACGTTGAACAGTATGCTGGATGTGTATTTGAAACGTCTAATTAGGTCATGTGTTGGCTTGGTGGAAGCTAGGTCTGCTAACGAACTGAGGAAGAGCTCGTCCCAGAAACAGCAGATTCAGGGTAAGGTCGTCAATGGCACGTGGCCAAGTAATAATTTACATGTGCAGAGCGGTGGGTCAACAGAACCTGTGGCTGATCGCAGACCACCATGCTCGGTATCTTTCTTAGATTTTAAAGTTGCCATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCAGTGCTGTTGGAGAAAATTTCTATGCACACGTTTGATGAATAA 1254 0.4641 MQPQQSSRIDLGEIKAQIVKRIGGDKSKRYFYCLNKFLSQKLSKNDFDKLCYRLLGRENLPLHNHFMRSVLTNVCQAKTSPPIQPSGPLKSGTLATTISPGREDGHEHSSSSFQNQSQNVSIWSNGVLPVSPRKLRSGIRDRKNRDRPSPLGPNGKVDSASLQSLGTEDSGSKVDMENGTLTPCDYQRPIQQLQAVAELPDNERRDAVECSAEKPRIHGKGPTGLSAVEDGEEVEQSTRFSRSPLLAPLGIPYCPASEGGAGRALPVVSTGDFLSCYDSGWLSDAETLRRRMEQIATVQGLGGVSTECANTLNSMLDVYLKRLIRSCVGLVEARSANELRKSSSQKQQIQGKVVNGTWPSNNLHVQSGGSTEPVADRRPPCSVSFLDFKVAMELNPQQLGEDWPVLLEKISMHTFDE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0578 417 MobiDBLite consensus disorder prediction 135 149 - -
Lele03g0578 417 MobiDBLite consensus disorder prediction 209 229 - -
Lele03g0578 417 MobiDBLite consensus disorder prediction 79 118 - -
Lele03g0578 417 MobiDBLite consensus disorder prediction 341 369 - -
Lele03g0578 417 MobiDBLite consensus disorder prediction 133 175 - -
Lele03g0578 417 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 331 IPR024738 GO:0070461
Lele03g0578 417 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 415 IPR024738 GO:0070461
Lele03g0578 417 MobiDBLite consensus disorder prediction 156 175 - -
Lele03g0578 417 MobiDBLite consensus disorder prediction 79 98 - -
Lele03g0578 417 MobiDBLite consensus disorder prediction 341 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0578 Lele-ChrLele03 3416954 3418207 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0551 25 3495472 3496734 Lele03g0578 03 3416954 3418207 CCT
Lele01g0573 01 3380568 3384047 Lele03g0578 03 3416954 3418207 hybridization
Lele02g0567 02 3405704 3406957 Lele03g0578 03 3416954 3418207 hybridization