Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0586 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAAATAAAAGCTCAAATTGTAAAGAGGATTGGTGGCGATAAGTCAAAACGGTACTTCTATTGCCTGAACAAGTTGTTGAGTCAGAAGCTGAGCAAGAATGATTTTGATAAGCTATGTTATCGGTTACTTGGGAGGGAGAATCTTCCACTACACAATCATTTTATGAGATCAGTTTTGAAGAATGCGTGCCAAGCCAAGAGGGCTCCTCCAATCCAGCCACCAGGCCCCTTGAAGTCTGGAACACTTGCAACAACAACATCTCCTGGTAGAGAGGATGGGCATGAACACAGTAGTTCTAGCTTCCAAAATCAAAGTCAAAATGCATCCATTTGGTCAAATGGGGTTTTACCAGTGTCCCCGCGTAAGATGAGGTCTGGTATACGGGATCGGAAGAACAGGGATAGACCCAGTCCACTTGGACCAAATGGGAAGGTTGATTCCGCTTCACATCAGCCCCTAGGTACAGAAGACAGTGGTAGTAAGGTTGACATGGAGAATGGGACTCTTACTCCATGTGATTATCAAAGACCAATACAGCAACTTCAAGCAGCTGCTGAGCTCCCTGACAATGAAAGGCGGGATGCAGTTGATCGTTCAGCTGAAAAACCAAGAATACATGGCAAAGGGCCATCTGGGTTATCAGCTGTTGAAGATGGGGAAGAAGTGGAGCAGTCAACCCGCTTCTCCAGAAGTCCCCTGCTTGCACCACTCGGAATTCCTTACTGCCCAGCAAGTGAGGGTGGAGCACGCCGAGCCTTGCCTGTGGTTAGCACAGGTGATTTTCTTACCTGTTATGACCGTGTCTGGTTGTCTGATGCAGAAACACTGAGAAGGCGCATGGAGCAGATTGCTACAGTACAGGGTCTTGGAGGTGTTTCCGTGGATTGTGCTAATACGTTGAACAGTATGCTGGATGTGTATTTGAAACGTCTAATTAGGTCATGTGTTGGCTTAGTGGAAGCTAGGTCTGCTAACGAACTGAGGAAGACCTCTTCCCAGAAACAGCAGATTCAGGTTAAGGTCATCAATGGCACGTGGCCAAGTAATAATTTACACATGCAGAGTGCAAGTGGGTCAACAGAACCTGTGCCTGATCGCAGGCCCCCATGCTCGGTATCTTTCTTAGATTTTAAAGTTGCCATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCAGTGCTGTTGGAGAAAATTTCTATGCACACGTTCAACGAATAA 1257 0.467 MQPQQSSRIDLGEIKAQIVKRIGGDKSKRYFYCLNKLLSQKLSKNDFDKLCYRLLGRENLPLHNHFMRSVLKNACQAKRAPPIQPPGPLKSGTLATTTSPGREDGHEHSSSSFQNQSQNASIWSNGVLPVSPRKMRSGIRDRKNRDRPSPLGPNGKVDSASHQPLGTEDSGSKVDMENGTLTPCDYQRPIQQLQAAAELPDNERRDAVDRSAEKPRIHGKGPSGLSAVEDGEEVEQSTRFSRSPLLAPLGIPYCPASEGGARRALPVVSTGDFLTCYDRVWLSDAETLRRRMEQIATVQGLGGVSVDCANTLNSMLDVYLKRLIRSCVGLVEARSANELRKTSSQKQQIQVKVINGTWPSNNLHMQSASGSTEPVPDRRPPCSVSFLDFKVAMELNPQQLGEDWPVLLEKISMHTFNE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0586 418 MobiDBLite consensus disorder prediction 135 149 - -
Lele04g0586 418 MobiDBLite consensus disorder prediction 160 177 - -
Lele04g0586 418 MobiDBLite consensus disorder prediction 110 126 - -
Lele04g0586 418 MobiDBLite consensus disorder prediction 78 241 - -
Lele04g0586 418 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 416 IPR024738 GO:0070461
Lele04g0586 418 MobiDBLite consensus disorder prediction 199 217 - -
Lele04g0586 418 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 331 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0586 Lele-ChrLele04 3544331 3545587 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0551 25 3495472 3496734 Lele04g0586 04 3544331 3545587 CCT
Lele01g0573 01 3380568 3384047 Lele04g0586 04 3544331 3545587 hybridization
Lele02g0567 02 3405704 3406957 Lele04g0586 04 3544331 3545587 hybridization