Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0239 ATGGAGGAAGAAAAGGTTCCTCTAGGCGTAGATGGCGGCGATTCGTCGAGGACTTCTTCCTCTTTTGTGAAAAAGGGAGACCGCCAAATGTTCACGGTGGAGCTCCGGCCTGCTGAGACTACTATAGTCTCCTGGAAGAAGCTGATGAAAGACTCTAACAAGGTTAATGGATCCACTTTGGCCCCCAAGCATCTAACCACTGCACACGCCGCCCTGGAGTCCAGAATCGCTTCTGTACAACCTACTGAAAATGAAACAAAAGATGGCGCTTTTCCTCATCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACACGGGCAAGGATAGCAGTGATGAAGACGATCTACTTGACGCTCCAGACGATGATCAATATGATACAGAAGACTCTTTCATTGACGATGCCGAGCTGGACGAATATTTTGAAGTTGATAATTCTGCAATCAAACATGATGGTTTCTTTGTGAACAGGGGAAAGTTGGAACGCATAAATGAGCCTCTGGTATTACCAAACCAGCAACCAAAGAAAAGGCGGAGAAAAGATATATTGAAGAATCCTGGTGAAAGTTATGATGGTCAAGAATCAAATAAACATGGAAGAGTGGGCAAGACTGCAGCTGGAAAGGGAGCATCATTACCTGTGAAAAAGACGTTGAATTCCTCACAGAACATGCCTGCATCTATTGAACACGATGACTTGAAATTTCAGAATCAATCGGTATCCTGTTCAAAAAAGAATATTGCTGATACTAAACCAGTATCAGATCCCGCGGCCTCTTTGAACGTATCAAATGATGATACTCCTCCAATAGTGACAGAAGCAAAAGATATTGATAAGCAGAATGTAGGAAATCTTCAATCCAGGAATGCAAATGACAAATACAAAGATGCCAGCGGATCATTTGATGCATGTCAAAAGAAATACCATGAAAAAAGTTCCTATTCACATTCCAAATCCCAACCTGGAAGACCTACAAGTAGTATTAATGGTGTGGAAAACAGAGTTCATTTGAAAGAAAAAAACGGTATCTGTGAACTGCCAGATCTTAACTTGTCTGAGGGAAGGACTTCCATGCAAGCAACGAAATTGCCATACACGCACAAGAAAGAAGGTGCTAGTGTTAGGCCAAAAACTTCGATGCTCGAAAAGGCTATTAGAGAGTTAGAGAAGATGGTTGCAGAATCAAGGCCACCTGCAATCGAAAACCAAGAGGCTGAGACTACGTCCCAGGCAGTCAAAAGGAGATTGCCTAGAGAAATAAAGCTAAAGCTTTCTAAAGTTGCTAGATTAGCGGCAAGCCATGGGAAAGTTTCAAAGGAGTTAATTAATCGTCTTATGAGTATTCTTGGGCACTTAATCCAGCTCAGAACATTAAAGAGACACTTAAAAATCATGATCAGTATGGGTCTGTCAGCAAAGCAGGAGAAAGATGCTAGTTTTCAAAGCATAAAGAAGGAGGTTGTCGAGATGATTAAGATGCAGGCCCCATCTATGGAACCCAAGCAACAGCAACAAGCTTCAGCTTCCGGTGACTTTCAAGGATTTGGCTCTGATGGAAAAGCATCAGAGAAAAGGATGGATGCTGCATTGGAGGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGATTGGATGATGATGCGGGCCCACAAATCCGAAAGTTGTATGCTGAGCTTGCGGAATTATGGCCGAATGGTTACATGGACAACCGTGGAATTAAAAAAGTAATCTGCAGGGCAAAAGAGAGGCGCAAAGCATTGTATATGAGACACAAGGATCATGAAAAAGTTAAGAGTAAAAAGATGTTGGCATCTCAGCAGGAGACTGTTCGATTTGATCCTAGTTCAGTTGCGTCACAACAGACCATGCGGGAGAGATTAACACCAGAATCTAGCACTCATGCATTTACTTCGGGGAACAAGCCAATTTCTAATACAATTAACACGGCTGGGGGCTCCAGTCCGTTGGTGAATGGTCCAAAACAGGAGAAAGTGAAGGGAAGTTCAATCAATCTGGAAGATGTGAGGGTAACAGATGGTGTTTTAACAAAGAAGGTGAAGAGGAAACCAGAGTTGGAGTTTGAAGGAACTGAGTCTCGTCCTGAGAAGCTTGCTTCTGTGCAAGGAGAAGAGAGGTCCAAGTCTTCAAAGCAGTCTGCAAGTCTTCCCCACAAGTCAAATATTCCGCCAACGTCACTTCCCGGTCTTGAACAGTCGAGTTAA 2229 0.4298 MEEEKVPLGVDGGDSSRTSSSFVKKGDRQMFTVELRPAETTIVSWKKLMKDSNKVNGSTLAPKHLTTAHAALESRIASVQPTENETKDGAFPHRFSAVIEKIERLYTGKDSSDEDDLLDAPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPLVLPNQQPKKRRRKDILKNPGESYDGQESNKHGRVGKTAAGKGASLPVKKTLNSSQNMPASIEHDDLKFQNQSVSCSKKNIADTKPVSDPAASLNVSNDDTPPIVTEAKDIDKQNVGNLQSRNANDKYKDASGSFDACQKKYHEKSSYSHSKSQPGRPTSSINGVENRVHLKEKNGICELPDLNLSEGRTSMQATKLPYTHKKEGASVRPKTSMLEKAIRELEKMVAESRPPAIENQEAETTSQAVKRRLPREIKLKLSKVARLAASHGKVSKELINRLMSILGHLIQLRTLKRHLKIMISMGLSAKQEKDASFQSIKKEVVEMIKMQAPSMEPKQQQQASASGDFQGFGSDGKASEKRMDAALEDKICDLYDLFVDGLDDDAGPQIRKLYAELAELWPNGYMDNRGIKKVICRAKERRKALYMRHKDHEKVKSKKMLASQQETVRFDPSSVASQQTMRERLTPESSTHAFTSGNKPISNTINTAGGSSPLVNGPKQEKVKGSSINLEDVRVTDGVLTKKVKRKPELEFEGTESRPEKLASVQGEERSKSSKQSASLPHKSNIPPTSLPGLEQSS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0239 742 MobiDBLite consensus disorder prediction 688 712 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 499 513 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 713 742 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 173 199 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 280 295 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 1 23 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 300 317 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 215 233 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 499 521 - -
Lele25g0239 742 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 15 727 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 115 129 - -
Lele25g0239 742 Pfam HPC2 and ubinuclein domain 120 162 IPR014840 -
Lele25g0239 742 MobiDBLite consensus disorder prediction 106 129 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 688 742 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 246 331 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 615 670 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 164 233 - -
Lele25g0239 742 MobiDBLite consensus disorder prediction 615 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0239 Lele-ChrLele25 1427143 1434801 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0239 25 1427143 1434801 Lele01g0286 01 1604929 1623171 CCT
Lele25g0239 25 1427143 1434801 Lele02g0269 02 1526648 1534086 CCT
Lele25g0239 25 1427143 1434801 Lele03g0290 03 1603626 1611315 CCT
Lele25g0239 25 1427143 1434801 Lele04g0277 04 1625204 1631869 CCT
Lele25g0239 25 1427143 1434801 Lele27g1848 27 23297066 23304932 hybridization
Lele25g0239 25 1427143 1434801 Lele28g0261 28 1538842 1545477 hybridization