Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0269 ATGAGAACAGTGACGGAACTAGGAAGAGCTGGCCATGCCGATTATGCACTACGAACCGTTTCGCTTCTAGCAGAGAAGGCTCCTCCCGTTGATGGCAGTAATTCGGCAAGGGTTTCATCGTTGTTCGCCAAAAAGGGTGACCGCCAAATTTTTACGGTGGAGCTCCGGCCTGGGGAGACCACCATAGTCTCATGGAAGAAGCTGATGAAAGACGCCAACAAGGTTAATGGATCCACTTCGGCTCCCGAATTTCCCACCAATGCACACCCGGCCCTGGAGTCAAGAATCGCTCCCGATCCCACTGCTGAAGACAAAGTAACCGATGCTTCCCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAGCGCCTTTACATGGGTAAGGAAAGTAGTGAGGAGGAAGATCTACTTGATGTTCCTGATGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGATCTGGATGAATATTTTGAGGTTGATAATTCGGTGATTAAACATGATGGCTTCTTTGTCAACAGGGGGAAGTTGGAACGCGTTGAACCATCAGTATCAGCCAACCAGCAGCCAAAGAAAAGGCGCAAAAAAGATGTGTTAAAGAGTCCTGGTGAAAGTTATGATGGTCAAGGATCAAATAAACATGTAAAACTGGGCAAGGCAGCAACTGGAAAATCAGCATTGTTACCGATGAAGAATACGTGTAATTCCTCACAAAATTTGGTTGTACCTAGTGAAAATTATGAGGAATCAAAATTTCAGAATCAATTGGATGTCCTGGGAATCAGTTCAAAAATGAAAACTGCTGATACTAAACCAGTATTGGATTCTTCTGTCTCTTTGAAAGTATCTTATGATGATGGTCCTACTTCTGTGACTGAAGCAAAGAATGTTGACAAACAGAATCCAGGAGTCCTTCAAATAAAGAACATGAGCAACAAACACAATGATGCAAGTACATCATGTGATGTTTCTCAACGGAAGTACCATGAAAAGAGTGCTGGTGTACATTCCAAATCCCTACCTGGAAGACCCACTAGTAATAATGATGATTTGGATGGTACAGGGCGGTCAAAAGAAAAAAATAGGATGTATGAATTGCCAGATCTTAACTTTACTGAGGGCAAGTCTGCCATGCAAAAAGCAAAATCACATTATATGCACAAGAAAGATGGTTCTAGTGTGAGGCCGAAAATTTCAGTTCTTGAAAAGGCAATTCGAGAGTTAGAGAAGATGGTAGTAGAGTCGAGGCCACCTGCAGGGGAAAACCAGGAGGTTGATACTGTATCCCAGGCAGTCAAAAGGAGACTGCCTAGAGACATAAAGCTAAAGCTTGATAAAGTTGCTAGAATAGCGGCAAGCCATGGGAAAGTATCAAAGGATTTAATTAACCGTCTGATGAGCATATTGGGTCACCTGATTCAGCTTAGAACACTGAAGAGACATTTAAAAGTGATGATAAGCATGAGCATGTCCGCAAAGCAGGAGAAAGATACTAGGTTTCAGCAGAAAAAGAAGGAAGTTGTTGAAATGATTAAGGTGCATGGCTCCTCACTGCCATCCAAGCTACAGCAAGGTGGAGCATCTGGTGATGGTCAAGAATTTGGTCCTGATGAAAAAGCTTTATCTGTAAGGAAGCTTAGTATGGACACTGCACTGGAGGACAAGATTTGTGATCTCTATGACCTTTTTGTCGATGGGTTGGATGAAGATGCAGGTCCACAAATCAGAAAATTTTATGCTGAGCTTGCACAATTATGGCCAAATGGCTGCATGGACAACCGTGAGATCAAACATGCAATTTCTAGAGCAAAAGAGAGGCGCAAAGCATTGTACAACAAACATAAGGAACAGGACAAAGTGAAGAGAAAAAAAATTTTGGGAGCTAAGCAGTTGGAGAATCTTCGATATGATGCCTTGCATCAGAACGTGCGAGAGAGATTAGCTCCAGAATCTAGCAGTCATGCTTTTACTTCAGTGAACAGACAAGTTTCTAATACAATCACCACTGCCCGGCCTCCCAGTTCTTCCATGAGTGGTCCTAAACACGAGAAAATTAAAGGAGGTTCAAGTAATCCCCGGGATAATGTCAGGGCAGCAGATGGTGTTATAAGAAAGAAGGTAAAGAGAAAAGCTGACCTGGAATCGGAAGTACCTCATATTCGTCCAGAAAAGCTGGGTTCTTTGCCGGGAGAAGAAAGGCCTAAGATCCTAAAGCAGACCGCAGGGCTTCCCCTGGAATCAAACTTTCAGCCGACATCTATTCCAAGTCTTGAACAGTCAAGTTAA 2298 0.4304 MRTVTELGRAGHADYALRTVSLLAEKAPPVDGSNSARVSSLFAKKGDRQIFTVELRPGETTIVSWKKLMKDANKVNGSTSAPEFPTNAHPALESRIAPDPTAEDKVTDASQPNRFSAVIEKIERLYMGKESSEEEDLLDVPDDDQYDTEDSFIDDADLDEYFEVDNSVIKHDGFFVNRGKLERVEPSVSANQQPKKRRKKDVLKSPGESYDGQGSNKHVKLGKAATGKSALLPMKNTCNSSQNLVVPSENYEESKFQNQLDVLGISSKMKTADTKPVLDSSVSLKVSYDDGPTSVTEAKNVDKQNPGVLQIKNMSNKHNDASTSCDVSQRKYHEKSAGVHSKSLPGRPTSNNDDLDGTGRSKEKNRMYELPDLNFTEGKSAMQKAKSHYMHKKDGSSVRPKISVLEKAIRELEKMVVESRPPAGENQEVDTVSQAVKRRLPRDIKLKLDKVARIAASHGKVSKDLINRLMSILGHLIQLRTLKRHLKVMISMSMSAKQEKDTRFQQKKKEVVEMIKVHGSSLPSKLQQGGASGDGQEFGPDEKALSVRKLSMDTALEDKICDLYDLFVDGLDEDAGPQIRKFYAELAQLWPNGCMDNREIKHAISRAKERRKALYNKHKEQDKVKRKKILGAKQLENLRYDALHQNVRERLAPESSSHAFTSVNRQVSNTITTARPPSSSMSGPKHEKIKGGSSNPRDNVRAADGVIRKKVKRKADLESEVPHIRPEKLGSLPGEERPKILKQTAGLPLESNFQPTSIPSLEQSS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0269 765 MobiDBLite consensus disorder prediction 747 765 - -
Lele02g0269 765 MobiDBLite consensus disorder prediction 312 326 - -
Lele02g0269 765 MobiDBLite consensus disorder prediction 185 220 - -
Lele02g0269 765 Coils Coil 597 617 - -
Lele02g0269 765 MobiDBLite consensus disorder prediction 702 735 - -
Lele02g0269 765 MobiDBLite consensus disorder prediction 312 366 - -
Lele02g0269 765 MobiDBLite consensus disorder prediction 652 765 - -
Lele02g0269 765 Pfam HPC2 and ubinuclein domain 141 182 IPR014840 -
Lele02g0269 765 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 36 718 - -
Lele02g0269 765 MobiDBLite consensus disorder prediction 652 680 - -
Lele02g0269 765 MobiDBLite consensus disorder prediction 192 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0269 Lele-ChrLele02 1526648 1534086 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0239 25 1427143 1434801 Lele02g0269 02 1526648 1534086 CCT
Lele02g0269 02 1526648 1534086 Lele02g0269 02 1526648 1534086 ECH
Lele02g0269 02 1526648 1534086 Lele03g0290 03 1603626 1611315 hybridization
Lele02g0269 02 1526648 1534086 Lele04g0277 04 1625204 1631869 hybridization