Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0290 ATGAAAGAGAACGCTCCTCCCGGTGATGTTAATTCGGCGAGGGTTTCATCGTTGTTCGCCAAAAAGGGTGACCGCCAAATTTTTACTTTGGAGCTCCGGCCTGGAGAGACCACAATAGTCTCATGGAAGAAGCTGATGAAAGACGCCAACAAGGTTAATGGATCCAATTCGGCTCCCGAACTTCCCGCCAATGCACACCCTGCCCTGGAGTCAAGAATCGCTCCTGATCCCACTGCTGAAGACAAAGTAACAGATGCTTCCCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAGCGCCTTTACATGGGTAAGGAGAGTAGTGACGAGGAAGATCTACTTGATGTTCCTGATGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGATCTGGATGAATACTTTGAGGTTGATAATTCGGTAATTAAACATGATGGCTTCTTTGTCAACAGGGGGAAGTTGGAACGCATTGAACCATCAGTATCAGCCAACCAACAGCCAAAGAAAAGGCGCAAAAAAGATGCATTGAAGAACCCTGGTGAAAGTTATGAAGGTCAAGGATCAAATAGACATGTAAAACCGGGCAATGCAGTGACTGGAAAAACAGCATTGTTACCAATGAAAACCAGATCTAATTCCTCACAAAATTTGGTCATACCTAGTGAAAATTATGAGGAATCAAAATTTCAGAATCAACTGGATGTCCTAGGAATCAGTTCGAAAATGAAAACTGCTGATACTAAACCAGTATTGGGTTCTTCTGTCTCTTTGAAAGTGTCTTATGATGATGGTCCTACTTCTGTGACTGAAGCAAAGAATTTTGATAAACAGAATGCAGGAGTCCTTCAAATAAAGAACATGAGCAACAAACACAATGATGCAAGTACATCATCCGATGTTTCTCAATGTAAGTACCGTGAAAAAAGTGCTGGTGCACATTCCAAATCCCCACCTGGAAGACCCACTGGTAATACTGATGTGTTGGAAGGTACAGGTCAGTCTAAAGAAAAAAATAGGATTTTTGAATTGCCAGATCTTAACCTTACTGAGGGCAAGTCTGCTATGCAAAAATCAAAATCACATTATATGCACAAGAAGGATGGTTCTAGTGTGAGGCCAAAAATTTCAGTTCTTGAAAAGGCAATTCGAGAGTTAGAGAAGATGGTTGTAGAATCGAGGCCACCTGCAGGGGAAAGCCAGGAGGATGATACTGTATCCCAGGCAGTCAAAAGGAGACTACCTAGAGAAATAAAGCTCAAGCTTGATAAAGTTGCTAGAATAGCGGCAAGCCATGGGAAAGTATCAAAGGATTTAGTTAACCGTTTGATGAGCATATTGGGCCATCTGATTCTGCTTAGAACACTGAAGAGACATTTAAAAGTGATGATAAGTATGAGCATGTCAGCAAAGCAGGAGAAAGATAATAGGTTTGAGCAGATAAAGAAGGAAGTTGTTGAAATGATTAAGGTGCAAGGCTCCTCACTGCTATCCAAGCTACAGCAACAAGGTGGAGCATCTGGTGATGGTCAAGAATTTGGTCCTGATAAAAAAGCTTTAACTGCAAGGAAGCTTAGTAGGGACACTGCACTGGAGGATAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGGTTGGATGAAGATGCAGGTCCACAAGTTAGAAAATTTTATGCTGAGCTTGCACAATTATGGCCAAATGGCTGCATGGACAACCATGAGATCAAACATGCAATTTCTAGAGCAAAAGAGAGGTGCAAAGCATTGTACAACAGACATAAGGATCAGGACAAAGTGAAGAGGGAAAAAATTTTAGGAGCTAGGCAGGAGGAGAATCTTCGATATGATGCCTTGCATCAGAACATGCGAGAGAGATTAGCTCCAGAATCTAGCAGTCATACCTTTACTTCAGTGAACAGGCAAGTTTCTAATACAATCACCACTGCCCGGGCTCCCAGTTCTTCCATGAGCGGTCCTAAACAAGAGAAAGTTAAAGGAGGTTCAAGTAATCCCCTGGATAATGTCAGGGCAGCAGATGGTGTTATAAGAAAGAAGGTAAAGAGAAAAGCTGAGCTAGAATCGGAAGGACCTCATATTCGTCCAGAAAAGCTGGGTTCTTTGCTGGGAGAAGAAAGGCCTAAGATCCTAACGCAGTCTGCGGGTCTTCCCCTCGAATCAAACTTTCAGCTGACACATATTCCAAGTCTTGAACAGTCAAGGTAA 2232 0.4229 MKENAPPGDVNSARVSSLFAKKGDRQIFTLELRPGETTIVSWKKLMKDANKVNGSNSAPELPANAHPALESRIAPDPTAEDKVTDASQPNRFSAVIEKIERLYMGKESSDEEDLLDVPDDDQYDTEDSFIDDADLDEYFEVDNSVIKHDGFFVNRGKLERIEPSVSANQQPKKRRKKDALKNPGESYEGQGSNRHVKPGNAVTGKTALLPMKTRSNSSQNLVIPSENYEESKFQNQLDVLGISSKMKTADTKPVLGSSVSLKVSYDDGPTSVTEAKNFDKQNAGVLQIKNMSNKHNDASTSSDVSQCKYREKSAGAHSKSPPGRPTGNTDVLEGTGQSKEKNRIFELPDLNLTEGKSAMQKSKSHYMHKKDGSSVRPKISVLEKAIRELEKMVVESRPPAGESQEDDTVSQAVKRRLPREIKLKLDKVARIAASHGKVSKDLVNRLMSILGHLILLRTLKRHLKVMISMSMSAKQEKDNRFEQIKKEVVEMIKVQGSSLLSKLQQQGGASGDGQEFGPDKKALTARKLSRDTALEDKICDLYDLFVDGLDEDAGPQVRKFYAELAQLWPNGCMDNHEIKHAISRAKERCKALYNRHKDQDKVKREKILGARQEENLRYDALHQNMRERLAPESSSHTFTSVNRQVSNTITTARAPSSSMSGPKQEKVKGGSSNPLDNVRAADGVIRKKVKRKAELESEGPHIRPEKLGSLLGEERPKILTQSAGLPLESNFQLTHIPSLEQSR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0290 743 MobiDBLite consensus disorder prediction 169 183 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 290 343 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 650 671 - -
Lele03g0290 743 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 12 673 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 105 127 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 650 715 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 681 712 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 157 218 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 112 127 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 51 91 - -
Lele03g0290 743 MobiDBLite consensus disorder prediction 290 308 - -
Lele03g0290 743 Pfam HPC2 and ubinuclein domain 118 159 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0290 Lele-ChrLele03 1603626 1611315 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0239 25 1427143 1434801 Lele03g0290 03 1603626 1611315 CCT
Lele03g0290 03 1603626 1611315 Lele03g0290 03 1603626 1611315 ECH
Lele01g0286 01 1604929 1623171 Lele03g0290 03 1603626 1611315 hybridization
Lele02g0269 02 1526648 1534086 Lele03g0290 03 1603626 1611315 hybridization