Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0261 ATGGAGGAAGAGAAGGTCCCTCTAGGCGTGGATGGCTGCGATTCGTCGAGGACTTGTTCCTCTTTTGTGAAAAAGGGAGACCGCCAAATGTTCGCGGTGGAGCTACGGCCCGCAGAGACTACTATAGTCTCGTGGAAGAAGCTGATGAAAGACTCTAACAAGGTTAATGGATCCACTTTGGCTCCCGAACAACTAACCTCTGCTAGCCCCGCCCTGGAGTCCAGAATCGCTCCCGTACGGCCTACTGAAAATGAAGCAACAGATGGCGCTTTTCCACATCGGTTCAGTGCTGTAATAGAGAAGATCGAACGCCTTTACATGGGCAAGGATAGCAGTGATGAGGACGATCTATTTGATGCTCCAGACGATGATCAATATGATACAGAAGACTCTTTCATTGACGATGCTGAGCTGGATGAATATTTTGAAGTTGATAATTCTGCAATCAAACATGATGGTTTCTTTGTGAACAGGGGGAAGTTGGAACGCATAAATGAGCCTCTGGTATTACCAAACCAGCAACCAAAGAAAAGGCGGAAAAAAGATATATTGAAGAATCCTGGTGAAAGATATGATGGTCAAGAATCAAATAAACATGGAAGAGTGGGCAAGACTGCAGCTGGAAAGGCAGCATCATTACCACTGAAAAAGACGTTGAATTCCTCAAAGAACTTGCCTGTATCTATTGAACATTATGATGATTTGAAATTTCAGAATCAATTGGTATCCTGTTCAAAGAAGAATATTGCTGGTGCTAAACCAGCATCAGATCCTGCTGTCTCTTCGAATGTATCAAATGATGATACTCCTCCAATAGTGATAGAAGCAAAAGATATTGATAAGCAGAATGTAGGAAATCTTCAATGCAGGAATGCAAATGACAGATACAAAGATGCCAGCGGATCATTTGATGCATGTCAAAATAAATACCATGAAAAAAGTTCCTGTGCACATTCCAAATCCCAACCTGGAAGATCTACAAGTAGTATTGATGGTGCGGAAAACAGAGTTCAGTCAAAAGAAAAAAATGGCATCTGTGAACTGCCAGATCTTAACTTGTCTGAGGGAAGGACTACCATGCAAGCAACGAAATTGCCACACACGCACGATAAAGAAGGTACTAGTGTTAGGCCAAAAACTTCGATGCTTGAAAAGGCTATTAGAGAGTTAGAGAAGATGGTTGCAGAATCAAGGCCACCTGCAATGGAAAACCAAGAGGCCGATACTACGTCCCAGGCAGTCAAAAGGAGATTGCCTAGAGAAATAAAGCTAAAGCTTTCTAAAGTTGCTAGATTAGCGGCAAGCCATGGGAAAGTTTCAAAAGAGTTAGTTAATCGTCTTATGAGTATTCTTGGGCACTTGATTCAGCTCAGAACATTAAAGAGACACCTAAAAATTATGATCAGTATGGGTCTGTCAGCAAAGCAGGAGAAAGATGCTAGGTTTCAAAGCATAAAGAAGGAGGTTGTCGAGATGATTAAGATGCAGCCTCCATCTCTGGAACCCAAGCAGCAACAAGCTTCAGCTTCCGGTGACTTTCAAGGATTTGGCTCTGATGGAAAAGTATCAAAGAAAAGGATGGATGCTGCATTGCAGGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGATTGGAGGATGATGCAGGCCCACAAATCCGAAAGTTGTATGCTGAGCTTGCGGAATTATGGCCGAATGGTTACATGGACAACCGTGGAATTAAAAAAGCAATCTGCAGGGCAAAAGAGAGGCGCAAAGCATTGTATATGAGACACAAGGATCATGAAAAAGTAAAGAGTAAAAAGATGTTGGCATCTCAGCAGGAGACTGTTCTATTTGATCCTAGTTCAGTTGCTTCACAACAGAGCATGCGGGAGAGAATAACGCCAGAATCTAGCAATCATGCATTTACTTCGGTGAGCAAGCAAGTTTCTAATACAATTAACACGGCTGGGGGCTCCAGTCCGTTAGTGAATGGTCCAAAACAGGAGAAAGTGAAGGGCAGTTCAATCAATCTGGAAGATGTTAGGGTTGTAGATGGTGTTGTAACAAAGAAGGTGAAGAGGAAACCGGAATTGGAGTTTGAAGGAACTGAGTCTCGCCCTGAGAAGCTTTCTTCTGTGCAGGGAGAAGAGAGGTCCAAGTCTTCAAAGCAGTCTGCAAGTCTTTCCCATAAGTCAAATGTTCAGCCAACGTCACTTCCTGGTCTTGAACAGTCGAGTTAA 2229 0.4293 MEEEKVPLGVDGCDSSRTCSSFVKKGDRQMFAVELRPAETTIVSWKKLMKDSNKVNGSTLAPEQLTSASPALESRIAPVRPTENEATDGAFPHRFSAVIEKIERLYMGKDSSDEDDLFDAPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPLVLPNQQPKKRRKKDILKNPGERYDGQESNKHGRVGKTAAGKAASLPLKKTLNSSKNLPVSIEHYDDLKFQNQLVSCSKKNIAGAKPASDPAVSSNVSNDDTPPIVIEAKDIDKQNVGNLQCRNANDRYKDASGSFDACQNKYHEKSSCAHSKSQPGRSTSSIDGAENRVQSKEKNGICELPDLNLSEGRTTMQATKLPHTHDKEGTSVRPKTSMLEKAIRELEKMVAESRPPAMENQEADTTSQAVKRRLPREIKLKLSKVARLAASHGKVSKELVNRLMSILGHLIQLRTLKRHLKIMISMGLSAKQEKDARFQSIKKEVVEMIKMQPPSLEPKQQQASASGDFQGFGSDGKVSKKRMDAALQDKICDLYDLFVDGLEDDAGPQIRKLYAELAELWPNGYMDNRGIKKAICRAKERRKALYMRHKDHEKVKSKKMLASQQETVLFDPSSVASQQSMRERITPESSNHAFTSVSKQVSNTINTAGGSSPLVNGPKQEKVKGSSINLEDVRVVDGVVTKKVKRKPELEFEGTESRPEKLSSVQGEERSKSSKQSASLSHKSNVQPTSLPGLEQSS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0261 742 MobiDBLite consensus disorder prediction 617 670 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 688 712 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 617 658 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 713 742 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 173 199 - -
Lele28g0261 742 Pfam HPC2 and ubinuclein domain 120 162 IPR014840 -
Lele28g0261 742 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 17 731 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 313 347 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 688 742 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 167 210 - -
Lele28g0261 742 MobiDBLite consensus disorder prediction 319 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0261 Lele-ChrLele28 1538842 1545477 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0239 25 1427143 1434801 Lele28g0261 28 1538842 1545477 hybridization
Lele26g0248 26 1475767 1483113 Lele28g0261 28 1538842 1545477 hybridization