Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0286 ATGACTACGATCGATCTCTCCATGGATCGTACGTCTTTGGTGGCCTCAGAATGGGATTTGAAGGGTAAAGAGAAGGCACAGAGAGGGGATTGGGAAGGTGGGGCTAGTGAAAAGGTTGAAGTGAGAAACTTTGGGGAGATAGGAGGTGAGGAGAAGAGGAATAAAGAGGTGGGGTTAGTGGTCCTGGGTTTTGGAGAGAGGGAACGAGCTTTGGTTCGCCATGAAGTCACCGCTCGAAACGCTCCTCTCGGTGATGGTACTTCGGTGAGGGTTTCATCGCTGTTCGCCAAAAAGGGTGACCGCCAAATTTTTACTTTGGAGCTCCGGCCCGGACAGACCACCATAGTCTCATGGAAGAAGCTGATGAAAGATGCCAACAAGGTTAATGGATCCACTTCGGCTCCCGAACTTCCCACCAATGCACACCCTGCCCTGGAGTCCAGACTCGCTCCTGATCCCACTGCTGAAGACAAAGTAACAGATGCTTCCCAGTCAAACCGTTTCAGTGCTGTAATAGAGGAGATTGAGCGCCTTTACATGGGTAAGGAGAGTAGTGACGAGGAAGATCTACTTGATGTTCCTGATGATGAACAGTATGATACAGAAGACTCTTTCATTGATGATGCTGATCTGGATGAATATTTTGAGGTTGATAATTCGGTAATTAAACATGATGGCTTCTTTGTCAACAGGGGGAAGTTGGAACACATTGAACCATCAGTATCAGCCAACCCACAGCCAAAGAAAAGGCGCAAAAAAGATGCAGTGAAGAATCCTGGTGAAAGTTATGAAGGTCAAGGATCAAATAAACATGTAAAACTGGGCAATGCGGCGACTGGAAAAACAGCATTGTTACCAATGAAAAATAGATCTAATTCCTCACAAAATTTGGTCATCACACCTAGTGAAAATTATGAGGAATCAAAATTTCAGAATCAACTGGATGTCCTAGGAATCAGTTCAAAAATGAAAACTGCTGATACTAAACCAGTATTGGGTTCTTCTGTCTCTTTCAAAGTGTCTTATGGTGATGATCCTACTTCTGTGACTGAAGCAAAGAATTTTGATAAACAGAATGCAGGAGTCCTTCAAATAAAGAACATGAGCAACAAACACAATGATGCAAGTTCATCATCTGATGTTTCTCAACTTAAGTACCGTGAAAAAAGTGCTGGTGCACATTCCAAATCCCAACCCGGAAAACCCACTGGTAATACTGATGAGTTAGAAGGTACAGGAGCATTGTCAAAAGAAAAAAATAGGATTTGTGAATTGCCAGATCTTAACCTAATTGAGGGCAAGTCTGCCATGCAAAAAGCATATATGCACAAGAAGGATGGTTCTAGTATGAGGCCGAAAATTTCAGTTCTTGAAAAGGGAATTCGAGAGTTAGAGAAGATGGTAGTAGAATCGAGGCCTCCTGCAGGGGAAAGCCAGGAGGCTGATACTGTATCCCAGGCAGTCAAAAGGAGACTGCCTAGAGAAATAAAGCTCAAGCTTGATAAAGTTGCTAGAATAGCGGCAAGCCATGGGAAAGTATCAAAGGATTTAGTTAACCGTCTGATGAGCATATTAGGGCACCTGATTCAGCTTAGAACACTGAAGAGACATTTAAAAGTGATGATAAGTATGAGCATGTCAGCAAAGCAGGAGAAAGATAATAGGTTTGAGCAGATAAAGGAGGAAGTTGTTGAAATGATTAAGGTACAAGGCTCCTCACTGCTAGCCAAGATACAGCAACAAGGTGGAGCATTTGGTGATGGTCAAGAATTTGGTCCTGATGAAAAGCCTTCAACTTCAAGGAAGCTTAGTGTGGACACTGCACTGGAGGATAAGATTTGTGATCTCTATGACCTTTTTGGGTTGGATGAAGATGCAGGTCCACAAGTTAGAAAATTTTATGCTGAGCTTGCACAATTATGGCCAAATGGCTGCATGGACAACCATGAGATCAAACATGCAATTTCTAGAGCAAAAGAGAGGCGCAAAGCATTGTACAACAGACATAAGGATCAGGACAAAGTGAAGCGAAAAAATATTTTGGGAGCTAGGCAGGAGGAGAATCTTCGATATAATGCCTTGCATCAGAACATGCGAGAGAGACATACTTTTACTTCAGTGAACAGGCAAGTTTCTAATACAATCACCACTGCCCGGGCACCCAGTTCTTCCATGAGCGGTCCTAAACAAGAGAAAGTTAAAGGAGGTTCAAGTAATCCCCGGGATAATGTCAGGGCAGCAGATGGTGTTATAAGAAAGAAGGTAAAGGGAAACGCTGAACTAGAATCTGAACGACCTCATATTCGTCCAGAAAAGCTGGGTTCTTTGCTGGGAGAAGAAAGGCCTAAGATCCTAAAGCATTCTGCGGGTCTTCCCCTCGAATCAAACTTCCAGCCGACATCTATTCCAAGTCTTGAACGGTCAAGTTAA 2430 0.4337 MTTIDLSMDRTSLVASEWDLKGKEKAQRGDWEGGASEKVEVRNFGEIGGEEKRNKEVGLVVLGFGERERALVRHEVTARNAPLGDGTSVRVSSLFAKKGDRQIFTLELRPGQTTIVSWKKLMKDANKVNGSTSAPELPTNAHPALESRLAPDPTAEDKVTDASQSNRFSAVIEEIERLYMGKESSDEEDLLDVPDDEQYDTEDSFIDDADLDEYFEVDNSVIKHDGFFVNRGKLEHIEPSVSANPQPKKRRKKDAVKNPGESYEGQGSNKHVKLGNAATGKTALLPMKNRSNSSQNLVITPSENYEESKFQNQLDVLGISSKMKTADTKPVLGSSVSFKVSYGDDPTSVTEAKNFDKQNAGVLQIKNMSNKHNDASSSSDVSQLKYREKSAGAHSKSQPGKPTGNTDELEGTGALSKEKNRICELPDLNLIEGKSAMQKAYMHKKDGSSMRPKISVLEKGIRELEKMVVESRPPAGESQEADTVSQAVKRRLPREIKLKLDKVARIAASHGKVSKDLVNRLMSILGHLIQLRTLKRHLKVMISMSMSAKQEKDNRFEQIKEEVVEMIKVQGSSLLAKIQQQGGAFGDGQEFGPDEKPSTSRKLSVDTALEDKICDLYDLFGLDEDAGPQVRKFYAELAQLWPNGCMDNHEIKHAISRAKERRKALYNRHKDQDKVKRKNILGARQEENLRYNALHQNMRERHTFTSVNRQVSNTITTARAPSSSMSGPKQEKVKGGSSNPRDNVRAADGVIRKKVKGNAELESERPHIRPEKLGSLLGEERPKILKHSAGLPLESNFQPTSIPSLERSS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0286 809 Pfam HPC2 and ubinuclein domain 194 235 IPR014840 -
Lele01g0286 809 MobiDBLite consensus disorder prediction 367 385 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 245 259 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 793 809 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 746 787 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 716 733 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 238 275 - -
Lele01g0286 809 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 88 738 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 716 809 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 367 418 - -
Lele01g0286 809 MobiDBLite consensus disorder prediction 128 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0286 Lele-ChrLele01 1604929 1623171 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0239 25 1427143 1434801 Lele01g0286 01 1604929 1623171 CCT
Lele01g0286 01 1604929 1623171 Lele01g0286 01 1604929 1623171 ECH
Lele01g0286 01 1604929 1623171 Lele03g0290 03 1603626 1611315 hybridization
Lele01g0286 01 1604929 1623171 Lele04g0277 04 1625204 1631869 hybridization