Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0277 ATGGAAGAGAAGGCTCCTCCCGGTGATGGTAGTAATTCGGCGAGGGTTTCATCGTTGTTCGCCAAAAAGGGTGACCGCCAAATTTTTACGGTGGAGCTCCGGCCTGGAGAGACCACCATAGTCTCATGGAAGAAGCTGATGAAAGACGCTAACAAGGTTAATGGATCCACTTCGGCTCCCGAATTTCCCGCCAATGCACACCCGGCCCTGGAGTCAAGAATCGCTCCTGATCCCACAGCTGAAGACAAAGTAACAGATGCTTCCCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAGCGCCTTTACATGGGTAAGGAAAGTAGTGACGAGGAAGATCCACTTGATGTTCCTGATGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGATCTGGATGAATATTTTGAGGTTGATAATTCAGTGATTAAACATGATGGCTTCTTTGTCAACAGGGGGAAGTTGGAACGCATTGAACCATCAGTATCAGCCAACCAGCAGCCAAAGAAAAGGCGCAAAAAAGATGCTTTAAAGAGTCCTGGTGAAAGTTATGATGGTCAAGGATCAAATAAACATGTAAAACTGGGCAAGGCAGCAACTGGAAAATCAGCATTGTTACCAATGAATAATACGTCTAATTCCTCACAAAATTTGGTTGTACCTAGTGAAAATTATGAGGAATCAAAATTTCAGAATCAATTGGATGTCCTGGGAATCAGTTCGAAAATGAAAACTGCTGATACTAAACCAGTATTGGATTCTTCTGTCTCTTTGAAAGTGTCTTATGATGATGGTCCTACTTCTGTGACTGAAGCAAAGAATGTTGATAAACAGAATGCAGGAGTTCTTCAAATAAAGAACATAAGCAACAAACACAATGATGCAAGTACATCATCTGATGTTTCTCAACGGAAGTACCATGATAAGAGTGCTGGTGTACATTCCAAATCCCAACCTGGAAGACCCACTAGTAATACTGATGATTTGGAAGGTACAGGTCGGTCAAAAGAAAAAAGTAGGATGTGTGAATTGCCAGATCTTAACTTTGCTGAGGGCAAGTCTGCCATGCAAAAAGCAAAATCACATTATATGCACAAGAAAGATGGTTCTAGTGTGAGGCTGAAAATTTCAGTTCTTGAAAAGGCAATTCGAGAGTTAGAGAAGATGGTAGTAGAATCGAGGCCACCTGCAGGGGAAAACCAGGAGGTTGATACTGTATCCCAGGCAGTCAAAAGGAGACTGCCTAGAGACATAAAGCTAAAGCTTGATAAAGTTGCTAGAATAGCGGCAAGCCATGGGAAAGTATCAAAGGATTTAATTAACCGTCTGATGAGCATATTGGGGCACCTGATTCAGCTTAGAACACTGAAGAGACATTTAAAAGTGATGATAAGCATGAGCATGTCAGCAAAGCAGGAGAAAGATACTAGGTTTCAGCAGATAAAGAAGGAAGTTGTTGAAATGATTAAGGTGCATGGCTCCTCACTGCCATCCAAGCTACAGCAACAAAGTGGAGCATCTGGTGATGCTCAAGAATTTGGTCCTGATGAAAAAGCTTTATCTGCAAGGAAGCTTAGTATGGACACTGCACTGGAGGACAAGATTTGTGATCTCTATGACCTTTTTGTCGATGGGTTGGATGAAGATGCAGGTCCACAAATCAGAAAATTTTATGCTGAGCTTGCACAATTATGGCCAAATGGCTGCATGGACAACCATGAGATCAAACATGCAATTTCTAGAGCAAAAGAGAGGCGCAAAGCATTGTACAACAAACATAAGGAACAGGACAAAGTGAAGAGGAAAAAAATTTTGGGAGCTAAGCAGTTGGAGAATCTTCGATATGATGCCTTGCATCAGAACGTGCGAGAGAGATTAGCTCCAGAATCTAGCAGTCATGCTTTTCCTTCAGTGAACAGACAAGTTTCTAATACAATCACCACTGCCCGGCCTCCCAGTTCTTCCATGAGTGGTCCTAAACACGAGAAAATTAAAGGAGGTTCAAGTAATCCCCGGGATAATGTCAGGGCAGCAGATGGTGTTATAAGAAAGAAGGTAAAGAGAAAAGCTGAACTGGAATCGGAAGCACCTCATAGTCGTCCGGAAAAGCTGGGTTCTTTGCTGGGAGAAGAAAGGCCTAAGATCTTAAAGCAGACCGCAGGGCTTCCCCTGGAATCAAACTTTCAGCCGACATCTATTCCAAGTCTTGAACAGTCAAGTTAA 2235 0.426 MEEKAPPGDGSNSARVSSLFAKKGDRQIFTVELRPGETTIVSWKKLMKDANKVNGSTSAPEFPANAHPALESRIAPDPTAEDKVTDASQPNRFSAVIEKIERLYMGKESSDEEDPLDVPDDDQYDTEDSFIDDADLDEYFEVDNSVIKHDGFFVNRGKLERIEPSVSANQQPKKRRKKDALKSPGESYDGQGSNKHVKLGKAATGKSALLPMNNTSNSSQNLVVPSENYEESKFQNQLDVLGISSKMKTADTKPVLDSSVSLKVSYDDGPTSVTEAKNVDKQNAGVLQIKNISNKHNDASTSSDVSQRKYHDKSAGVHSKSQPGRPTSNTDDLEGTGRSKEKSRMCELPDLNFAEGKSAMQKAKSHYMHKKDGSSVRLKISVLEKAIRELEKMVVESRPPAGENQEVDTVSQAVKRRLPRDIKLKLDKVARIAASHGKVSKDLINRLMSILGHLIQLRTLKRHLKVMISMSMSAKQEKDTRFQQIKKEVVEMIKVHGSSLPSKLQQQSGASGDAQEFGPDEKALSARKLSMDTALEDKICDLYDLFVDGLDEDAGPQIRKFYAELAQLWPNGCMDNHEIKHAISRAKERRKALYNKHKEQDKVKRKKILGAKQLENLRYDALHQNVRERLAPESSSHAFPSVNRQVSNTITTARPPSSSMSGPKHEKIKGGSSNPRDNVRAADGVIRKKVKRKAELESEAPHSRPEKLGSLLGEERPKILKQTAGLPLESNFQPTSIPSLEQSS 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0277 744 Pfam HPC2 and ubinuclein domain 119 160 IPR014840 -
Lele04g0277 744 MobiDBLite consensus disorder prediction 104 128 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 158 230 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 636 659 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 681 714 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 113 128 - -
Lele04g0277 744 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 14 714 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 629 744 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 52 92 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 288 346 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 208 230 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 500 519 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 288 304 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 170 184 - -
Lele04g0277 744 MobiDBLite consensus disorder prediction 726 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0277 Lele-ChrLele04 1625204 1631869 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0239 25 1427143 1434801 Lele04g0277 04 1625204 1631869 CCT
Lele04g0277 04 1625204 1631869 Lele04g0277 04 1625204 1631869 ECH
Lele01g0286 01 1604929 1623171 Lele04g0277 04 1625204 1631869 hybridization
Lele02g0269 02 1526648 1534086 Lele04g0277 04 1625204 1631869 hybridization