Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1766 ATGCCTCCGTCGTCGAACCCGTCCCTCAGCCTGAAACAACGGGTTTTCGCGTGCCTTACCAAGCTTTCCGATAGAGATACGCAGTTGCTCGCTGCTGCCGAGCTCGAGTCCATTGCTCGGAACCTCGATCCGAGCTCTCTGTCGGTTTTTCTCTCCTGCATACACTCCACCGATGTATCGGACAAACCCTCGGTTCGGAGACAATGCGTGCGAGTCTTGGAGGTGCTGTGTGAGACGCATGGAAATTCGCTGTCTCCTTATCTTTCGAAAATTCTTGGCAATATAGTTCGTCGGCTCCGTGACCCCGATTCGTCGGTTCGATCCGCTTGTGTTAATTCCGTTTCGGCATTGTCGACTCACGTCACTAAGCAACCGTTTTCCTCTTTTCTAAAACCGTTGGCGGAGGCCGTGTTCACTGAGCAGGACCAGAATTCGCAGATGGCCGCGGCTCTTTGTTTGGCTTCTGCCATTGATGCCGTTCCGGATCCGGAGCCGGCGAGATTGATGAAGCTCTTGCCCAGGTTCGAGAAGTTACTGAAGTGCCAGGGATTTAAGGCAAAGCCGGCGCTGTTGACGCTGATAGGAAGCGTTATTGAGGTTGGTGCGGCGTCGAGTCCTGGGGCTTTGACAAACTTGGTTCCTTGCGTGATGCAATTCTTGAGTAACAAAGATTGGGCTGCAAGGAAGGCTGCGGCCGAGGCGTTGATGAAGCTGGCAATAGTGGAAAGGCAAATGTTATCAGAACACAAGGCGAGATGTTTGAAAGTTTTCGAGAATCGACGATTCGATAAGGTGAAGGTTGTTCGGGAAGTTATGAATCAGATGCTGGAAGCGTGGAAGCATATAGCTGATGTTTCCGATGAATTTTCTCCCCCTCCTCAATCGCAAGTTTCATCCAAAGAGAATGCAAGTGATGGGCGCTATCCACCAGTCGTGCAGAGTTCATGCGCCCCTGGGTTTGCAGCCTCACAATTTCGGAAAAAATCCACTCCAGTTAGCAGATCTACCCCTCCGGACAGTTATACTGCTAGCAAAACTAAGAAGATTAGCCCTTTAAGTAGTAACAAGAGAATGAACTCAAATGTGCCGCGAAAGCTGAACCAGAAGAACTGGGATGTTCAAATAACTGTGCCGAATGCTCCCTCTGCGGCTTACCAGGGTGAACCTGAAGAGAGGGATGAGTTTGTCACGGAAAGAAGCAAAAAGGAGAAAACACGGTTTTCAAAGCCGGAAATGAGAAGGGCCCTTTTTGGTAAAAACAATGATGAAAAAATTCACAAGTTTGGCGGGTCCAAAACTGGATCTCGCGTAGTTCCTTGCCTTGAAGACAGTGAAGAATCAGTTGCTGTTACTCATGGCGCCAAAGATCAAAACAAGAGTGACAGAGAGTGTGAAGATTTATCTTTGATCCGCAACCAGTTATCTGAAATTGAAAAGCAGCAATCGAGCTTGCTTGATCTTCTGCAGAGATTCATAGGAAGCTCACAAAACGGAATGCAATCTTTGGAGACTCGTGTGCATGGCCTCGAGTTGGCATTAGATGAGATCTCTTATGATTTAGCTGTATCAAGTGGAAGGATGACTAATGCTGATGCTCCCGGGAGGACTTGTTGCTTGCTGTCTGGTGCAGAATTTTTAAGCTCCAAGCTCTGGAGGAAAACACAGAGCAGGTATTCATCCTCCTGGATCTCTAGATCTGCCGGCACTCCATCACTATCTGGCATGCACTACGGAGCTGACAAGAATGGCAGTATTGAGAGAAATCACAGATTAAGGTTCCATGGTGATCGAGGTTTCATCACTAATCCTCTGGCAGAGGTTCATTTGAACTCAAGGGAGACATCAAGTATTGCGCATGAGTAA 1863 0.4831 MPPSSNPSLSLKQRVFACLTKLSDRDTQLLAAAELESIARNLDPSSLSVFLSCIHSTDVSDKPSVRRQCVRVLEVLCETHGNSLSPYLSKILGNIVRRLRDPDSSVRSACVNSVSALSTHVTKQPFSSFLKPLAEAVFTEQDQNSQMAAALCLASAIDAVPDPEPARLMKLLPRFEKLLKCQGFKAKPALLTLIGSVIEVGAASSPGALTNLVPCVMQFLSNKDWAARKAAAEALMKLAIVERQMLSEHKARCLKVFENRRFDKVKVVREVMNQMLEAWKHIADVSDEFSPPPQSQVSSKENASDGRYPPVVQSSCAPGFAASQFRKKSTPVSRSTPPDSYTASKTKKISPLSSNKRMNSNVPRKLNQKNWDVQITVPNAPSAAYQGEPEERDEFVTERSKKEKTRFSKPEMRRALFGKNNDEKIHKFGGSKTGSRVVPCLEDSEESVAVTHGAKDQNKSDRECEDLSLIRNQLSEIEKQQSSLLDLLQRFIGSSQNGMQSLETRVHGLELALDEISYDLAVSSGRMTNADAPGRTCCLLSGAEFLSSKLWRKTQSRYSSSWISRSAGTPSLSGMHYGADKNGSIERNHRLRFHGDRGFITNPLAEVHLNSRETSSIAHE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1766 620 ProSiteProfiles HEAT repeat profile. 212 250 IPR021133 -
Lele24g1766 620 Gene3D - 8 369 IPR011989 -
Lele24g1766 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 570 IPR033337 GO:0005874|GO:0008017
Lele24g1766 620 MobiDBLite consensus disorder prediction 287 310 - -
Lele24g1766 620 MobiDBLite consensus disorder prediction 326 362 - -
Lele24g1766 620 MobiDBLite consensus disorder prediction 323 362 - -
Lele24g1766 620 MobiDBLite consensus disorder prediction 387 408 - -
Lele24g1766 620 MobiDBLite consensus disorder prediction 289 303 - -
Lele24g1766 620 FunFam TORTIFOLIA1-like protein 3 isoform A 3 360 - -
Lele24g1766 620 SUPERFAMILY ARM repeat 7 277 IPR016024 -
Lele24g1766 620 MobiDBLite consensus disorder prediction 383 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1766 Lele-ChrLele24 22822876 22825264 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1010 17 20837998 20839200 Lele24g1766 24 22822876 22825264 CCT
Lele19g0547 19 3173915 3175117 Lele24g1766 24 22822876 22825264 CCT
Lele20g0903 20 15406727 15411140 Lele24g1766 24 22822876 22825264 CCT
Lele21g1830 21 25857242 25859610 Lele24g1766 24 22822876 22825264 hybridization
Lele22g1805 22 23168969 23171353 Lele24g1766 24 22822876 22825264 hybridization