Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1830 ATGCCTCCATCGTCGAACCCGTCCCTCAGCCTGAAACAACGGATTTTCGCGTGCCTCGCCAAGCTTTCCGACCGAGATACACAGTTTCTTGCTGCGGCCGAGCTTGAGTCCATTGCTCGGAACCTCGATCCGAGCTCTCTGTCGGTTTTTCTCTCCTGCATACACTCCACCGATGCGTCGGACAAACCTTCGGTTCGGAGACAATGCGTGCGAGTATTGGAGGTGCTTTGTGAGACGCATGGAAATTCGCTGTCTCCTTATCTTTCGAAAATTCTAGGAAATATAGTTCGTCGGCTCCGTGACCCCGATTCGTCGGTTCGATCCGCTTGTGTGAATTCCGTTTCGGCATTGTCGACTCACGTCACTAAGCAACCGTTTTCCTCTTTTCTGAAACCGTTGGCGGAGGCCCTGTTCACCGAACAGGACCATAACGCGCAGATGGCCGCGGCGCTTTGTTTGGCTTCTGCTGTTGATGCCGTTCCGGATCCGGAGCCGGCGAGATTGATGAAGCTCTTGCCCAGGTTCGAGAAGTTACTGAAGTGCGAGGGATTTAAGGCAAAGCCGGCCCTGTTGACGCTGATCGGAAGCGTTATTGAGGTTGGTGCGGCATCGAGTCATGGTGCTTTGACAAACTTGGTTCCTTGTGTGATGGAATTCTTGAGTAACAAAGATTGGGCTGCAAGGAAGGCTGCGGCCGAGGCGTTGATGAAGCTGGCAATAGTGGAAAGGGAAATGTTATCAGAACACAAGGCGAGATGTTTGAAAGTTTTCGAGAATCGACGATTCGATAAGGTGAAGGTTGTTCGGGAAGTTATGAATCAGATGCTGGAAGCGTGGAAGCAGATAGCTGATATTTCCGAAGAATTTTCTCCACCACCTCAATCGCAAGCTTCGTCCAAAGAGTATGCAAGTGATAGACACTATCCACCAGTCGTGCAGAGTTCATGCGCCCCTGGTTCTGTAGTGTCACAATTTCGGAAAAAATCCATTCCAGTTACCATATCTACCCCTCCGGACAGTTATACTCCCAGCAAAACTAAGAAGATTAGTCCTTTAAATAGTAACAAGAGAATGAACTCCTATGTGCCGCGAAAGCTGAGCCAGAAGAACTGGGATGTTACTGTGCCGAATGCTCCCTCTGCGGCTTACCGAGGTGATCCTGAAGAGAGGGACGATTTTGTCACGGAAAGAAGCAAAAAGGAGAAAACACGGTTTCCAAAACCGGAAATGAGAAGGGCTCTTTTTGGTAAAAGCACCGATGAAAAAATTCACAAGGGGTCCAAAACTGGATCTCGTGTAGTTCCTTGCCATGAAGACAGTGAAGTCTCAGTTGCTGTTAGTACTGGCGCCAAAGATCAAAACAAGAATGACAAAGGGTGTGAAGATTTATCTTTGATCCGCAACCAGTTATCTGAAATTGAAAAGCAGCAGTCGAGCTTGCTTGATCTTCTGCAGAGATTCATTGGAAGCTCACAAAATGGAATGCAATCTTTGGAGACTCGTGTGCATGGCCTTGAGTTGGCATTAGATGACATCTCTTATGACTTAGCTGTATCAAGTGGAAGAATGACTAAGGCTGATGCTCCCGGGAGGACTTGTTGCTTGCTGTCTGGTGCAGAATTCTTAAGCTCCAAGTTCTGGAGGAAAACACAAGGCCAGTATTCATCCTCCTCGATCTCTAGATCTGCTGGCACTCCATCGCTAGCCACAATGCACTACGGAGCTGACAAGAATGGCAGTATTGAGAGAAATCACGGATTAAGGTTTCGTGGTGATCGAGGTTTCATAACTAATCCTCTGGCGGAGGTTCATTTGAACTCAAGGGAGACATCAAATATTTCAGATGAGTAA 1851 0.4797 MPPSSNPSLSLKQRIFACLAKLSDRDTQFLAAAELESIARNLDPSSLSVFLSCIHSTDASDKPSVRRQCVRVLEVLCETHGNSLSPYLSKILGNIVRRLRDPDSSVRSACVNSVSALSTHVTKQPFSSFLKPLAEALFTEQDHNAQMAAALCLASAVDAVPDPEPARLMKLLPRFEKLLKCEGFKAKPALLTLIGSVIEVGAASSHGALTNLVPCVMEFLSNKDWAARKAAAEALMKLAIVEREMLSEHKARCLKVFENRRFDKVKVVREVMNQMLEAWKQIADISEEFSPPPQSQASSKEYASDRHYPPVVQSSCAPGSVVSQFRKKSIPVTISTPPDSYTPSKTKKISPLNSNKRMNSYVPRKLSQKNWDVTVPNAPSAAYRGDPEERDDFVTERSKKEKTRFPKPEMRRALFGKSTDEKIHKGSKTGSRVVPCHEDSEVSVAVSTGAKDQNKNDKGCEDLSLIRNQLSEIEKQQSSLLDLLQRFIGSSQNGMQSLETRVHGLELALDDISYDLAVSSGRMTKADAPGRTCCLLSGAEFLSSKFWRKTQGQYSSSSISRSAGTPSLATMHYGADKNGSIERNHGLRFRGDRGFITNPLAEVHLNSRETSNISDE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1830 616 Pfam HEAT repeat 212 239 IPR000357 GO:0005515
Lele21g1830 616 ProSiteProfiles HEAT repeat profile. 212 250 IPR021133 -
Lele21g1830 616 FunFam TORTIFOLIA1-like protein 3 isoform A 3 360 - -
Lele21g1830 616 MobiDBLite consensus disorder prediction 376 406 - -
Lele21g1830 616 Gene3D - 9 336 IPR011989 -
Lele21g1830 616 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 567 IPR033337 GO:0005874|GO:0008017
Lele21g1830 616 SUPERFAMILY ARM repeat 11 287 IPR016024 -
Lele21g1830 616 MobiDBLite consensus disorder prediction 384 406 - -
Lele21g1830 616 MobiDBLite consensus disorder prediction 334 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1830 Lele-ChrLele21 25857242 25859610 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1010 17 20837998 20839200 Lele21g1830 21 25857242 25859610 CCT
Lele19g0547 19 3173915 3175117 Lele21g1830 21 25857242 25859610 CCT
Lele20g0903 20 15406727 15411140 Lele21g1830 21 25857242 25859610 CCT
Lele21g1830 21 25857242 25859610 Lele23g0180 23 1151035 1153412 hybridization
Lele21g1830 21 25857242 25859610 Lele24g1766 24 22822876 22825264 hybridization