Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1805 ATGCCTCGGTCGTCGAACACGTCCCTCAGCCTGAAACAACGGGTTTTCGCGTGCCTTACCAAGCTTTCCGACAGAGATACACAGCTGCGCGCTGCTGCCGAGCTCGAGTCCATTGCTCGGAACCTTGATCCGAGCTCTCTGTCGGTTTTCCTCTCCTCCATACACTCCACCGATGCGTCGGACAAACCATCGGTTCGGAGACAATGCGTGCGAGTCTTGGAGGTGCTGTGTGAGACGCATGGAAATTCGCTGTCACCTTATCTTTCGAAAATTCTTGGCAATATAGTTCGTCGGCTCCGTGACCCCGATTCGTCGGTTCGATCCGCTTGTGTGAATTCCGTTTCGGCATTGTCGACTCACGTCACTAAGCAACCGTTTTCCTCTTTTCTAAAACCGTTGGCGGAGGCCCTGTTCACCGAGCAGGACCAGAATTCGCAGATGGCCGCGGCGCTTTGTTTGGCTTCTGCCATTGATGCCGTTCCGGATCCGGAGCCGGCGAGATTGATGAAGCTCTTGCCCAGGTTCGAGAAGTTACTGAAGTGCGAGGGATTTAAGGCAAAGCCGGCGCTGTTGACGCTGATCGGAAGCGTTATTGAGGTTGGTGCGGCGTCGAGTCCTGGGGCTTTGACAAACTTGGTTCCTTGCGTGATGCAATTCTTGAGTAACAAAGATTGGGCTGCAAGGAAGGCTGCGGCCGAGGCGTTGATGAAGCTGGCAATAGTGGAAAGGGAAATGCTATCAGAACACAAGGCGAGATGTTTGAAAGTTTTCGAGAATCGACGATTCGATAAGGTGAAGGTTGTTCGGGAAGTTATGAATCAGATGCTGGAAGCGTGGAAGCATATAGCTGATGTTTCCGATGAATTTTCTCCCCCTCCTCAATCGCAAGCTTCATCCAAAGAGAATGCAAGTGATGGGCGCTATCCACCAGTCGAGCAGAGTTCATGCGCCCCTGGTTCTGTAGTGTCACAATTTCGGAAAAAATCCACTCCAGTTAGCAGATCTACCCCTCCGGACAGTTATACTGCTAGCAAAACTAAGAAGATTAGTCCTTTAAGTAGTAACAAGAGAATGAACTCAAATGTGCCGCGAAAGCTGAACCAGAAGAACTGGGATGCTCAAATAAATGTGCCGAATGCTCCCTCTGCGGCTTACCAGGGTGATCCTGAAGAGAGGGACGAGTTTGTCACGGAAAGAAGCAAAAAGGAGAAAACACGGTTTTCAAAGCCGGAAATGAGAAGGGCTCTTTTTGGTAAAAACACTGATGAAAAAATTCACAAGTTTGGTGGGTCCAAAACTGGATCTCGTGTAGTTCCTTGCCTTGAAGACAGTGAAGAGTCAGTTGCTGTTACTCATGGCGCCAAAGATCAAAACAAGAGGGACAAAGAGTGTGAAGATTTATCTTTGATCCGCAACCAGTTATCTGAAATTGAAAAGCAGCAATCGAGCTTGCTTGATCTTCTGCAGAGATTCATTGGAAGCTCACAAAACGGAATGCAATCTTTGGAGACTCGTGTGCATGGCCTCGAGTTGGCATTAGATGAGATCTCTTATGATTTAGCTGTATCAAGTGGAAGGATGACTAATGCTGATGCTCCCGGGAGGACTTGTTGCTTGCTGTCTGGTGCAGAATTTTTAAGCTCCAAGCTCTGGAGGAAAACACAGAGCAGGTATTCATCCTCCTGGATCTCTAGATCTGCCGGCACTCCATCACTATCTGCCATGCACTACGGAGCTGACAAGAATGGCAGTATTGAGAGAAATCACGGATTAAGGTTCCGTGGTGATGGAGGTTTCATCACTAATCCTCTGGCAGAGGTTCATCTGAACTCAAGGGAGACATCAAATATTGCGCATGAGTAA 1863 0.4868 MPRSSNTSLSLKQRVFACLTKLSDRDTQLRAAAELESIARNLDPSSLSVFLSSIHSTDASDKPSVRRQCVRVLEVLCETHGNSLSPYLSKILGNIVRRLRDPDSSVRSACVNSVSALSTHVTKQPFSSFLKPLAEALFTEQDQNSQMAAALCLASAIDAVPDPEPARLMKLLPRFEKLLKCEGFKAKPALLTLIGSVIEVGAASSPGALTNLVPCVMQFLSNKDWAARKAAAEALMKLAIVEREMLSEHKARCLKVFENRRFDKVKVVREVMNQMLEAWKHIADVSDEFSPPPQSQASSKENASDGRYPPVEQSSCAPGSVVSQFRKKSTPVSRSTPPDSYTASKTKKISPLSSNKRMNSNVPRKLNQKNWDAQINVPNAPSAAYQGDPEERDEFVTERSKKEKTRFSKPEMRRALFGKNTDEKIHKFGGSKTGSRVVPCLEDSEESVAVTHGAKDQNKRDKECEDLSLIRNQLSEIEKQQSSLLDLLQRFIGSSQNGMQSLETRVHGLELALDEISYDLAVSSGRMTNADAPGRTCCLLSGAEFLSSKLWRKTQSRYSSSWISRSAGTPSLSAMHYGADKNGSIERNHGLRFRGDGGFITNPLAEVHLNSRETSNIAHE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1805 620 SUPERFAMILY ARM repeat 11 277 IPR016024 -
Lele22g1805 620 Gene3D - 7 364 IPR011989 -
Lele22g1805 620 MobiDBLite consensus disorder prediction 379 408 - -
Lele22g1805 620 MobiDBLite consensus disorder prediction 316 363 - -
Lele22g1805 620 ProSiteProfiles HEAT repeat profile. 212 250 IPR021133 -
Lele22g1805 620 FunFam TORTIFOLIA1-like protein 3 isoform A 2 360 - -
Lele22g1805 620 MobiDBLite consensus disorder prediction 289 303 - -
Lele22g1805 620 MobiDBLite consensus disorder prediction 387 408 - -
Lele22g1805 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 570 IPR033337 GO:0005874|GO:0008017
Lele22g1805 620 MobiDBLite consensus disorder prediction 286 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1805 Lele-ChrLele22 23168969 23171353 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1010 17 20837998 20839200 Lele22g1805 22 23168969 23171353 CCT
Lele19g0547 19 3173915 3175117 Lele22g1805 22 23168969 23171353 CCT
Lele20g0903 20 15406727 15411140 Lele22g1805 22 23168969 23171353 CCT
Lele22g1805 22 23168969 23171353 Lele23g0180 23 1151035 1153412 hybridization
Lele22g1805 22 23168969 23171353 Lele24g1766 24 22822876 22825264 hybridization