Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1729 ATGCCGGGAATAACTGATAATGGAGTTACTGATGAGGGGGAGGCAAATGAAAGGAATAGAAATCCTCCCCCATCTAACTCTAAGGAGGCCTCAGCTCCAATTGAGTCACCACATCCTGAGAGTTCAGATGTTGATGGTGCCGTTGACACCTCTATTGACCAGCTTTATGAAAATGTGTATGACATGCAAAGTTCTGACCGGTCTCCTTCAAGGCAAAGTTTCGGATCTGATGGTGATGAATCTAGGATTGATTCAGAATTGCATCATCTAGTTGGAGGGAAGATGAGGGAGATGGAGATAATGGAAGAGGAAATGGAGGAAAAGCAAGGTGGCGATGGAAGTACCGAAACATCTTCTAGAAAGGGTAGTTTGTCAAATGATAGGAAGGTGGACAATGTGGATGAGATTCAACCTGCGAGTACAAGTTCTGTCGCTTCTGAAAAACCAAACAAACCATCCAATGCAAAATTACAATCTAAGACAGCAGTAGAATCAAAACCCAAAGTCAAAAATCGTCCTGTGAAGCCTTCTTTTGAGAGAAAGAATGATAAGCCTTTGAAAAAACCAAGCACAGGAGTTGTTAGCTCGAAGAAATCACAAACTGCTCCTCCTGGAAGGTCAGTGTCACAGAGTCGTGCCAAGAATTTAGTTGAACCAGCATCAGATAAGCTGGAGATAGGCCCAAGTTTGCTTAAGCAGGCAGCAGATCTGATGTCATCAGGGGATAATCCGCATAAGGCTCTTGAATTAGCTCTTCGAGCTACAAAAGTGTTTGAGAAGTATGCTGGTGAGAAACCAAGTTTAGAGCTTGTTATGAGCTTACATGTTGCAGCATCAATATACTGCAGCTTGGGTCAATACAATGATGCGATTCCAGTTCTCAAGCGCTCTATTGAGATTCCTGTTATTGAGGAAGGCGAGGAGCATGCCCTGGGTAAATTTACTGGTCTGATGCAACTGGGTGACACCTATGCAATGCTGGGCCAGCTTGAGAATGCAATTACATACTACACCAAAGGCATGGAAGTCCAGAAACAGATTCTGGGAGAAACAGATCAGAGAGTTGGTGAAACTTGTCGCTATCTCGCTGAGGCTCATGTTCAAGCGTTGCAATTTGATGAGGCTGAGAGGCTCTGCCAAATGGCTTTAGACATTCATAGAGCAAGAGATTCGCCCCCTTCTATCGAAGAGGCAGCGGATAGGAGGCTCATGGGCCTTATATGCGAAGCAAAGGGAAAGCACGAAGCAGCTCTAGAGCATCTTGTTTTAGCAAGCATGGCAATGGTAGAAAATGGACAAGAAGCGGAAGTGGCATCTGTTGATTGTAGCATTGGAGACACGTATCTATCCTTGTCTCGATACGACGAGGCTGTTTTTGCTTATCAAAAAGCACTTACAGCTTTCAAGGCCACCAAAGGAGAGAATCATCCAGCTGTGGCTTTGGTTTTTGTACGTTTCGCTACCTTGTATAAGAAGACAGGGAAGATAAAGGAATCCAAATCTTACTGTGAGAGTGCACTTAAAATCTATGAGAAGCCTCTTCCTGGGGTCCTTCTAGAGGATATTGCAAGTGGTCTCACGGATGTTGCCGCTATCTATGAGTCGATGAATGAATATGAACAAGCACTCAATCTACTGAAGAAGGCGTTGGGTATATATAACAATGCCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATGGGGGTCTTGTACTACGTTTTAGGGGACTATACTGAATCTTACAATGTTTTCAACAGTGCTATCTCAAAGCTTCGTGCCATCGGAGAGAAGAGATCAGCCTTCTTTGGTATCGCTCTCAATCAAATGGGACTTTCCTGTGTGCATCGTTATGCCCTAAGCGAGGCTGCAGAATTGTTTGAAGAGGCAAAGAGTATTTTGGAGCAAGAGTATGGGCCATATCACCCTGAAACGCTTGGCGTATATAGCAATCTTGCCGGCACATATGATGCACTTGGCAGGTTGGATGATGCAATTGAAATTCTGGAGTACGTTGTTAGTTTAAGGGAGGAAAAACTTGGGACAGCAAACCCTGATGTTTATGATGAGAAGAGAAGGTTGAGTGAACTGTTGAAGGAAGCAGGTAGAGTTCGGAGCAGAAAATCCGTACCACTGGAGCGCCTTCTTCATTCCAATCTCTATTCTCTCAACAATTTTGTCACGAGGATGGCTAGCTAG 2205 0.4435 MPGITDNGVTDEGEANERNRNPPPSNSKEASAPIESPHPESSDVDGAVDTSIDQLYENVYDMQSSDRSPSRQSFGSDGDESRIDSELHHLVGGKMREMEIMEEEMEEKQGGDGSTETSSRKGSLSNDRKVDNVDEIQPASTSSVASEKPNKPSNAKLQSKTAVESKPKVKNRPVKPSFERKNDKPLKKPSTGVVSSKKSQTAPPGRSVSQSRAKNLVEPASDKLEIGPSLLKQAADLMSSGDNPHKALELALRATKVFEKYAGEKPSLELVMSLHVAASIYCSLGQYNDAIPVLKRSIEIPVIEEGEEHALGKFTGLMQLGDTYAMLGQLENAITYYTKGMEVQKQILGETDQRVGETCRYLAEAHVQALQFDEAERLCQMALDIHRARDSPPSIEEAADRRLMGLICEAKGKHEAALEHLVLASMAMVENGQEAEVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKATKGENHPAVALVFVRFATLYKKTGKIKESKSYCESALKIYEKPLPGVLLEDIASGLTDVAAIYESMNEYEQALNLLKKALGIYNNAPGQQSTIAGIEAQMGVLYYVLGDYTESYNVFNSAISKLRAIGEKRSAFFGIALNQMGLSCVHRYALSEAAELFEEAKSILEQEYGPYHPETLGVYSNLAGTYDALGRLDDAIEILEYVVSLREEKLGTANPDVYDEKRRLSELLKEAGRVRSRKSVPLERLLHSNLYSLNNFVTRMAS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1729 734 Gene3D Tetratricopeptide repeat domain 425 604 IPR011990 GO:0005515
Lele24g1729 734 ProSiteProfiles TPR repeat profile. 438 471 IPR019734 GO:0005515
Lele24g1729 734 SUPERFAMILY TPR-like 355 514 IPR011990 GO:0005515
Lele24g1729 734 Pfam Tetratricopeptide repeat 525 557 - -
Lele24g1729 734 Gene3D Tetratricopeptide repeat domain 605 711 IPR011990 GO:0005515
Lele24g1729 734 Coils Coil 536 556 - -
Lele24g1729 734 MobiDBLite consensus disorder prediction 192 213 - -
Lele24g1729 734 ProSiteProfiles TPR repeat profile. 523 556 IPR019734 GO:0005515
Lele24g1729 734 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 39 721 - -
Lele24g1729 734 Pfam Tetratricopeptide repeat 437 512 - -
Lele24g1729 734 Pfam Tetratricopeptide repeat 607 679 - -
Lele24g1729 734 ProSiteProfiles TPR repeat profile. 314 347 IPR019734 GO:0005515
Lele24g1729 734 Pfam MalT-like TPR region 275 428 IPR041617 -
Lele24g1729 734 MobiDBLite consensus disorder prediction 56 76 - -
Lele24g1729 734 MobiDBLite consensus disorder prediction 163 187 - -
Lele24g1729 734 Gene3D Tetratricopeptide repeat domain 209 314 IPR011990 GO:0005515
Lele24g1729 734 MobiDBLite consensus disorder prediction 135 161 - -
Lele24g1729 734 SUPERFAMILY TPR-like 477 679 IPR011990 GO:0005515
Lele24g1729 734 MobiDBLite consensus disorder prediction 1 213 - -
Lele24g1729 734 MobiDBLite consensus disorder prediction 77 114 - -
Lele24g1729 734 SMART tpr_5 398 431 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 356 389 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 606 639 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 480 513 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 438 471 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 564 597 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 648 681 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 314 347 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 523 556 IPR019734 GO:0005515
Lele24g1729 734 SMART tpr_5 271 304 IPR019734 GO:0005515
Lele24g1729 734 Gene3D Tetratricopeptide repeat domain 315 424 IPR011990 GO:0005515
Lele24g1729 734 SUPERFAMILY TPR-like 228 385 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1729 Lele-ChrLele24 22561475 22564313 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1729 24 22561475 22564313 Lele17g1038 17 21001136 21003319 CCT
Lele24g1729 24 22561475 22564313 Lele18g0496 18 2938540 2942307 CCT
Lele24g1729 24 22561475 22564313 Lele19g0519 19 3009877 3012609 CCT
Lele24g1729 24 22561475 22564313 Lele20g0940 20 15580090 15582726 CCT
Lele23g0216 23 1449554 1452040 Lele24g1729 24 22561475 22564313 ECH
Lele24g1729 24 22561475 22564313 Lele24g1729 24 22561475 22564313 ECH
Lele21g1792 21 25581416 25583909 Lele24g1729 24 22561475 22564313 hybridization
Lele22g1769 22 22911686 22914542 Lele24g1729 24 22561475 22564313 hybridization