Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0940 ATGAAGGGTGCGAATTCGGTCTGGGATACCGCGAGCAACGAAGGATCAACGATTTCAGATTGTGAAAGTGCTGTTTCTGGAAGTGATCATGTGCAGCACCAAATATTCATTCTGGGTTTGGGGACGCTTGGGGCGAACATGAAGGTCGTTGCCATTCATAGGAATGCTTGTTCTAGCGTTATGGCTCAAGGTCGAATTCAATCATTTCGGGTTTATATGCGAGCTGAGGAGAAGCGTCGTGGTAATGCCAATGTGAAGTATGCGTGGTATGGGACTTCTGGCAAGGAAGAGATACGAGAAATTGTCACACGGTTTTGTAATTGCGGTAAAACTCGGAATAATGGACATTTTGGTAGCGGATTATTTCTCTTCAGACGTCTAAGACACTTATTACTCTGTCGCGCTATTTTGGGGAGGCAGGAGCTTATGCTTCCTGGTTCTGATCAATGGCTTCCGAGGCTGGTGAAGTTTGAAGAAACTGTAAGAAAACCATCTTCCCCTTGGATTCCATTTCCAAGTCTAATTTCTGCGCTCTCTAAGTTTTTGCCTCCATCTACTATTACCTTGATCTCCAAGTTCCACAAAGATCACAAAGAATTTTATACATCTAGCAGCTGTAACTTTTGCAGTCTCAGCCTTGTTCTTTGCGCATGTTTTAGTTATCGAATATCTAACAGTTTGGATATGTATTTGTGCTTCAGAAAACGTGCAAGCGTTCAGCTAAGGAGCAAGTCTGAATGGGATTTGGATCCTTTACTTTTTCATGTTCAGATGGGGTCTTCTTCTGACAAGACTTCATCTTTAGCCAAGGCGGCCACAGACTCAGCCCACTGCTCACCAAGTTTCCTTGTGGCATGTCTGATTGGTAATGGTTTCAGTTTTCCATCTCAAGGGTTGATACAGTAA 906 0.436 MKGANSVWDTASNEGSTISDCESAVSGSDHVQHQIFILGLGTLGANMKVVAIHRNACSSVMAQGRIQSFRVYMRAEEKRRGNANVKYAWYGTSGKEEIREIVTRFCNCGKTRNNGHFGSGLFLFRRLRHLLLCRAILGRQELMLPGSDQWLPRLVKFEETVRKPSSPWIPFPSLISALSKFLPPSTITLISKFHKDHKEFYTSSSCNFCSLSLVLCACFSYRISNSLDMYLCFRKRASVQLRSKSEWDLDPLLFHVQMGSSSDKTSSLAKAATDSAHCSPSFLVACLIGNGFSFPSQGLIQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0940 301 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 31 158 IPR044964 -
Lele20g0940 301 SUPERFAMILY ADP-ribosylation 47 149 - -
Lele20g0940 301 ProSiteProfiles RST domain profile. 162 199 IPR022003 -
Lele20g0940 301 Pfam RCD1-SRO-TAF4 (RST) plant domain 163 199 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0940 Lele-ChrLele20 15580090 15582726 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1792 21 25581416 25583909 Lele20g0940 20 15580090 15582726 CCT
Lele22g1769 22 22911686 22914542 Lele20g0940 20 15580090 15582726 CCT
Lele23g0216 23 1449554 1452040 Lele20g0940 20 15580090 15582726 CCT
Lele24g1729 24 22561475 22564313 Lele20g0940 20 15580090 15582726 CCT
Lele17g1038 17 21001136 21003319 Lele20g0940 20 15580090 15582726 hybridization
Lele18g0496 18 2938540 2942307 Lele20g0940 20 15580090 15582726 hybridization