Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0216 ATGCCGGGAGTAACTGATAATGGAGTTACTGATGAGGGGAAGGCAAATGAAAGGAATGTAAATCCTTCCCCCTCTCACTCTAAGGAGGCCTCAACTACAATTGAGTCACAGCATCCTGAGAGTTCAGGTGTTGATGGTGCCGTTGACACCTCTATTGACCAGCTTTATGAAAATGTGTATGATATGCAAAGTTCTGATCGGTCACCTTCGAGGCAAAGTTTTGGATCTGATGGGGATGAATCTAGGATTGATTCAGAATTGCATCATCTAGTTGGAGGGAAGATGAGGGAGGTGGAGATAATGGAGGAGGAAATGGAGGAAAAGCAAGGTGGCGATGGAAGTAGCGAAACATCTTCTAGAAAGGGTAGTTTGTCAAATGATAGGAAGGTGGACAATGTGGATGAGATTCAACCTGCGAGTACGAGTTCTGTCACTTCTGAAAAACCAAACAAACCATCAAATGCAAAATTACAATCCAAGACAGCGTTAAAATCAAAACCCAAAGTAAAAAATCCTCCTGTGAAGCCATCTTTTGAGAGAAAGATTGATAAGCCTTTGAAAAAACCAAGCACGGGAGTTGTTAGCTCGAAGAAACAACAAAATGCTCCTCCTCCTGGAAGGTCAGTGTCACAGAGTCGTGCCAAGAATTTAGTTGAACCAGCATCAGATAAGCCAGAGATGGGACCAATTTTGCTTAAGCAGGCAGCGGATCAGATGTCATCAGGGGATAATCCGCATAAGGCTCTTGAATTAGCCCTTCGAGCTACAAAATTGTTTGAGAAGTATGCTGGTGAGAAACCAAGTTTAGAGCTTGTTATGAGCTTACATGTTGCAGCATCAATATACTGCAGCTTGGGTCAATACAATGATGCGATTCCAGTTCTCGAGCGCTCTGTTGAGATTCCTGTTATTGAGGAAGGCGAGGAGCATGCCCTGGGTAAATTTGCTGGTCTGATGCAACTGGGTGACACCTATGCAATGCTGGGCCAACTTGAGAATGCAATTACGTACTACACCAAAGGTTTGGAAATCCAGAAACAGATGTTGGGAGAAACAGATCAGAGAGTTGGTGAAACTTGTAGGTATCTGGCTGAAGCTCATGTTCAAGCTTTGCAATTTGATGAGGCTGAGAGGCTCTGCCAAATGGCTCTGGAAATTCATAGAGCAAGAGATTCGCTCCCTTCTCTCGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGCGAAACGAAAGGAAAGCATGAAGCAGCTCTAGAGCATCTTGTATTAGCAAGCATGGCAATGGTAGCAAATGGACAAGAAGCGGAAGTGGCATCTGTTGATTGTAGCATTGGAGACACGTATCTATCCTTGTCTCGATATGATGAGGCTATTTTTGCTTATCAAAAAGCACTTGCAGCCTTCAAGGCCAGCAAAGGAGAGAATCATCCAGCTGTGGCTTTGGTTTTTGTACGTCTAGCTACCTTGTATAAGAAGACAGGGAAGATAAAGGAATCCAAATCTTACTGTGAGAGTGCACTTAAAATCTATGAGAAGCCTCTTCCTGGGGTCCATCTTGAGGATATTGCAAGTGGTCTCACTGATGTTGCCGCTATCCATGAGTCAATGAATGAACGTGAACATGCGCTCAATCTACTGAAGAAGGCGTTGGGTATATATAACAATGCCCCTGGTCAGCAGAGCACAGTAGCAGGAATTGAAGCTCAGATGGGGGTTTTGTACTACATTGTAGGGGACTATACTGAATCTTACAATGCTTTCAACAATGCTATCTCAAAGCTTCGTGCGACAGGAGAGAAGAGATCGGCCTTCTTTGGTATTGCTCTTAATCAAATGGGACTTTCCTGTGTGCAGCGTTATGCCCTAACCGAGGCTGCAGAATTGTTTGAAGAGGCAAAGAGTATTTTGGAACAAGAGTATGGACCATATCACCCCGAAACACTAGGTGTATATAGCAATCTTGCCGGCACATATGATGCCCTTGGCAGGTTGGATGAAGCAATTGAAATTCTGGAGTACGTTGTTAGCTTAAGGGAGGAAAAACTTGGGACGTCAAATCCTGATGTTTATGATGAGAGGAGAAGGTTGAGTGAATTGTTGAAGGAAGCGGGTAGAGTTCGGAGCAGAAAATCCGTATCACTGGAGCGCCTTCTTGATTCCAATCTTTATTCTCTAAACAATTTTGTCATGAGGATGGCTAGCTAG 2208 0.4407 MPGVTDNGVTDEGKANERNVNPSPSHSKEASTTIESQHPESSGVDGAVDTSIDQLYENVYDMQSSDRSPSRQSFGSDGDESRIDSELHHLVGGKMREVEIMEEEMEEKQGGDGSSETSSRKGSLSNDRKVDNVDEIQPASTSSVTSEKPNKPSNAKLQSKTALKSKPKVKNPPVKPSFERKIDKPLKKPSTGVVSSKKQQNAPPPGRSVSQSRAKNLVEPASDKPEMGPILLKQAADQMSSGDNPHKALELALRATKLFEKYAGEKPSLELVMSLHVAASIYCSLGQYNDAIPVLERSVEIPVIEEGEEHALGKFAGLMQLGDTYAMLGQLENAITYYTKGLEIQKQMLGETDQRVGETCRYLAEAHVQALQFDEAERLCQMALEIHRARDSLPSLEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQEAEVASVDCSIGDTYLSLSRYDEAIFAYQKALAAFKASKGENHPAVALVFVRLATLYKKTGKIKESKSYCESALKIYEKPLPGVHLEDIASGLTDVAAIHESMNEREHALNLLKKALGIYNNAPGQQSTVAGIEAQMGVLYYIVGDYTESYNAFNNAISKLRATGEKRSAFFGIALNQMGLSCVQRYALTEAAELFEEAKSILEQEYGPYHPETLGVYSNLAGTYDALGRLDEAIEILEYVVSLREEKLGTSNPDVYDERRRLSELLKEAGRVRSRKSVSLERLLDSNLYSLNNFVMRMAS 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0216 735 MobiDBLite consensus disorder prediction 135 165 - -
Lele23g0216 735 ProSiteProfiles TPR repeat profile. 315 348 IPR019734 GO:0005515
Lele23g0216 735 MobiDBLite consensus disorder prediction 173 187 - -
Lele23g0216 735 MobiDBLite consensus disorder prediction 1 227 - -
Lele23g0216 735 Pfam MalT-like TPR region 278 390 IPR041617 -
Lele23g0216 735 ProSiteProfiles TPR repeat profile. 439 472 IPR019734 GO:0005515
Lele23g0216 735 SUPERFAMILY TPR-like 475 680 IPR011990 GO:0005515
Lele23g0216 735 MobiDBLite consensus disorder prediction 14 48 - -
Lele23g0216 735 Pfam Tetratricopeptide repeat 438 513 - -
Lele23g0216 735 Pfam Tetratricopeptide repeat 608 680 - -
Lele23g0216 735 ProSiteProfiles TPR repeat profile. 649 682 IPR019734 GO:0005515
Lele23g0216 735 Gene3D Tetratricopeptide repeat domain 599 705 IPR011990 GO:0005515
Lele23g0216 735 Gene3D Tetratricopeptide repeat domain 221 421 IPR011990 GO:0005515
Lele23g0216 735 MobiDBLite consensus disorder prediction 56 76 - -
Lele23g0216 735 Gene3D Tetratricopeptide repeat domain 422 598 IPR011990 GO:0005515
Lele23g0216 735 MobiDBLite consensus disorder prediction 77 114 - -
Lele23g0216 735 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 37 722 - -
Lele23g0216 735 SUPERFAMILY TPR-like 270 420 IPR011990 GO:0005515
Lele23g0216 735 SMART tpr_5 357 390 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 607 640 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 481 514 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 315 348 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 565 598 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 649 682 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 439 472 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 272 305 IPR019734 GO:0005515
Lele23g0216 735 SMART tpr_5 524 557 IPR019734 GO:0005515
Lele23g0216 735 MobiDBLite consensus disorder prediction 192 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0216 Lele-ChrLele23 1449554 1452040 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0216 23 1449554 1452040 Lele17g1038 17 21001136 21003319 CCT
Lele23g0216 23 1449554 1452040 Lele18g0496 18 2938540 2942307 CCT
Lele23g0216 23 1449554 1452040 Lele19g0519 19 3009877 3012609 CCT
Lele23g0216 23 1449554 1452040 Lele20g0940 20 15580090 15582726 CCT
Lele23g0216 23 1449554 1452040 Lele24g1729 24 22561475 22564313 ECH
Lele23g0216 23 1449554 1452040 Lele23g0216 23 1449554 1452040 ECH
Lele21g1792 21 25581416 25583909 Lele23g0216 23 1449554 1452040 hybridization
Lele22g1769 22 22911686 22914542 Lele23g0216 23 1449554 1452040 hybridization