Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0496 ATGAAGGGTGCGAATTCGGTCTGGGATACCGCGAGCAACGAAGGATCAACGATTTCAGATTGTGAAAGTGCTGTTTCTGGAAGTGATCATGTGCAGCACCAGATGTTCGGTGAAAGTTTTCTTAGACTAGCTGAAGGAGACAGGGTTCATGATCAATTCAAAGAAGATTCATTCTGGGTTTGGGGACGTTTGGGGCGAACACGAAGTCTGAAAAGCGCTGTTGTTGACAAAGACGGTCTAAGACACTTATTCCACTGTCGCGTTATTTTGGGGAGGCAGGAGCTTATGCTTCCTGGCTCTGATCAATGGCTTCCGAGTTCTGAAGAATATGACTCAGGGGTGGACAGCCTTTCAGCTCCCAGGAAGTATATCATTTCGTGTAGCCGGATGACCACTCGTATTTTTCCAGAATATGTTGTAAGTTTCAAAGTTCCTAGCATGAAAGGGCTGGTGAAGTTTGAAGAAACTTTAAGAAAACCATCTTCCCCTTGGATTCCATTTCCAAGTCTAATTTCTGCGCTCTCTAAGTTTTTGCCTCCATCTACTATTACCTTGATCTCCAAGTTCCACAAAGATCACAAATATGCTTTTGAATTTGGTTGTCAAATCATTTTTGGGGATCGCTGTGCAAGTGTTGATATCCTATATACTTGCAAATGAAAACGTGCAAGCGTTCAGCTAAGGTATGACACTGGAGTTGACATGATTGATGCTCACTGGCATGGAATCACTAATGGAGAGAAGGCACAACGCACAACATCGCCTCGAGGGATCACTGGTTGCTGA 786 0.4415 MKGANSVWDTASNEGSTISDCESAVSGSDHVQHQMFGESFLRLAEGDRVHDQFKEDSFWVWGRLGRTRSLKSAVVDKDGLRHLFHCRVILGRQELMLPGSDQWLPSSEEYDSGVDSLSAPRKYIISCSRMTTRIFPEYVVSFKVPSMKGLVKFEETLRKPSSPWIPFPSLISALSKFLPPSTITLISKFHKDHKYAFEFGCQIIFGDRCASVDILYTCKXKRASVQLRYDTGVDMIDAHWHGITNGEKAQRTTSPRGITGC 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0496 261 ProSiteProfiles PARP catalytic domain profile. 1 162 IPR012317 GO:0003950
Lele18g0496 261 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 69 194 IPR044964 -
Lele18g0496 261 Gene3D - 26 144 - -
Lele18g0496 261 SUPERFAMILY ADP-ribosylation 75 144 - -
Lele18g0496 261 Pfam RCD1-SRO-TAF4 (RST) plant domain 159 194 IPR022003 -
Lele18g0496 261 ProSiteProfiles RST domain profile. 158 194 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0496 Lele-ChrLele18 2938540 2942307 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1792 21 25581416 25583909 Lele18g0496 18 2938540 2942307 CCT
Lele22g1769 22 22911686 22914542 Lele18g0496 18 2938540 2942307 CCT
Lele23g0216 23 1449554 1452040 Lele18g0496 18 2938540 2942307 CCT
Lele24g1729 24 22561475 22564313 Lele18g0496 18 2938540 2942307 CCT
Lele18g0496 18 2938540 2942307 Lele19g0519 19 3009877 3012609 hybridization
Lele18g0496 18 2938540 2942307 Lele20g0940 20 15580090 15582726 hybridization