Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1792 ATGCCGGGTGTAACTGATAGTGATAATGGAGTTACTGATGAGGGGAAGGCAAATGAAAGGAATGTAAATCCTTCCCCCTCTCACTCTAAGGAGGCCTCAGCTACAATTGAGTCACAGCATCCTGAGAGTTCAGGTGTTGATGGTGCCGCTGACACCTCTATTGACCAGCTTTATGAAAATGTGTATGATATGCAAAGTTCTGATCGGTCACCTTCGAGGCAAAGTTTTGGATCTGATGGGGATGAATCTAGGATTGATTCAGAATTGCATCATCTAGTTGGAGGGAAGATGAGGGAGGTGGAGATAATGGAGGAGGAAATGGAGGAAAAGCAAGGTGATGGCGATGGAAGTAGCGAAACATCTTCTAGAAAGGGTAGTTTGTCAAATGATAGGAAGGTGGACAATGTGGATGAGATTCAACCTGCGAGTAAGAGTTCTGTCACTTCTGAAAAACCAAACAAACCATCAAATGCAAAATTACAATCCAAGACAGCGTTAAAATCAAAACCCAAAGTAAAAAATCCTCCTGTGAAGCCATCTTTTGAGAGAAAGAATGATAAGCCTTTGAAAAAACCAAGCACGGGAGTTGTTAGCTCGAAGAAACCACAAAATGCTCCTCCTCCTGGAAGGTCAGTGTCACAGAGTCGTGCCAAGAGTTTAGTTGAACCAGCATCAGATAAGCCAGAGATGGGACCAATTTTGCTTATGCAGGCAGCCGATCAGATGTCATCAGGGGATAATCCGCATAAGGCTCTTGAATTAGCCCTTCGAGCTACAAAAGTGTTTGAGAAGTATGCTGGTGAGAAACCAAGTTTAGAGCTTGTTATGAGCTTACATGCTGCAGCATCAATATACTGCAGCTTGGGTCAATACAATGATGCGATTCCAGTTCTCGAGCGCTCTGTTGAGATTCCTGTTATTGAGGAAGGCGAGGAGCATGCCCTGGGTAAATTTGCTGGTCTGATGCAACTGGGTGACACCTGTGCAATGCTTGGCCAACTTGAGAATGCAATTGCGTACTACAGCAAAGGTTTGGAAATCCAGAAACAGATGTTGGGAGAAACAGATCAGAGAGTTGGTGAAACTTGTAGGTATCTGGCTGAAGCTCATGTTCAAGCTTTGCAATTTGATGAGGCTGAGAGGCTCTGCCAAATGGCTCTGGAAATTCATAGAGCTAGAGATTCGCTCCCTTCTTTCGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGCGAAACGAAAGGAAAGCATGAAGCAGCCCTAGAGCATCTTGTATTAGCAAGCATGGCAATGGTAGCAAATGGCCAAGAAGCTGAAGTGGCATCTGTTGATTGTAGCATTGGAGACACGTATCTATCCTTGTCTCGATATGATGAGGCTGTTTTTGCTTATCAAAAAGCACTTACAGCCTTCAAGGCCAGCAAAGGAGAGAATCATCCAGCTGTGGCTTTGGTTTTTGTACGTTTAGCTACCTTGTATAAGAAGACAGGGAAGATAAAGGAATCCAAATCTTACTGTGAGAGTGCACTTAAAATCTATGAGAAGCCTCTTCCTGGGGTCCATCTTGAGGATATTGCAAGTGGTCTCACTGATGTTGCCGCTATCTATGAGTCAATGAATGAACATGAACAGGCGCTCAATCTACTGAAGAAGGCGTTGGGTATATATAACAATGCCCCTGGTCAGCAGAGCACAATAGCAGGAATTGAAGCTCAGATGGGGGTTTTGTACTACATTGTAGGGGACTATACTGAATCTTACAATGCTTTCAACAATGCTATCTCAAAGCTTCGTGCTACTGGAGAGAAGAGGTCGGCCTTCTTTGGTATTGCTCTTAATCAAATGGGACTTTCCTGTGTGCAGCGTTATGCCCTAACCGAGGCTGCAGAATTGTTTGAAGAGGCGAAGAGTATTTTGGAACAAGAGTATGGACCATATCACCCCGAAACACTTGGCGTATATAGCAATCTTGCCGGCACATATGATGCACTTGGCAGGTTGGATGAAGCAATTGAAATTCTGGAGTACGTTGTTAGCTTAAGGGAGGAAAAACTTGGGACGTCAAATCCTGATGTTTATGATGAGAGGAGAAGGTTGAGTGAATTGTTGAAGGAAGCGGGTAGAGTTCGAAGCAGAAAATCCGTATCACTGGAGCGCCTTCTTGATTCCCATCTTTATTCTCTAAACAATTTTGTCACGAGGATGGCTAGCTAG 2217 0.4425 MPGVTDSDNGVTDEGKANERNVNPSPSHSKEASATIESQHPESSGVDGAADTSIDQLYENVYDMQSSDRSPSRQSFGSDGDESRIDSELHHLVGGKMREVEIMEEEMEEKQGDGDGSSETSSRKGSLSNDRKVDNVDEIQPASKSSVTSEKPNKPSNAKLQSKTALKSKPKVKNPPVKPSFERKNDKPLKKPSTGVVSSKKPQNAPPPGRSVSQSRAKSLVEPASDKPEMGPILLMQAADQMSSGDNPHKALELALRATKVFEKYAGEKPSLELVMSLHAAASIYCSLGQYNDAIPVLERSVEIPVIEEGEEHALGKFAGLMQLGDTCAMLGQLENAIAYYSKGLEIQKQMLGETDQRVGETCRYLAEAHVQALQFDEAERLCQMALEIHRARDSLPSFEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQEAEVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKASKGENHPAVALVFVRLATLYKKTGKIKESKSYCESALKIYEKPLPGVHLEDIASGLTDVAAIYESMNEHEQALNLLKKALGIYNNAPGQQSTIAGIEAQMGVLYYIVGDYTESYNAFNNAISKLRATGEKRSAFFGIALNQMGLSCVQRYALTEAAELFEEAKSILEQEYGPYHPETLGVYSNLAGTYDALGRLDEAIEILEYVVSLREEKLGTSNPDVYDERRRLSELLKEAGRVRSRKSVSLERLLDSHLYSLNNFVTRMAS 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1792 738 ProSiteProfiles TPR repeat profile. 527 560 IPR019734 GO:0005515
Lele21g1792 738 MobiDBLite consensus disorder prediction 58 78 - -
Lele21g1792 738 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 39 725 - -
Lele21g1792 738 Pfam Tetratricopeptide repeat 441 516 - -
Lele21g1792 738 Pfam Tetratricopeptide repeat 611 683 - -
Lele21g1792 738 Gene3D Tetratricopeptide repeat domain 234 424 IPR011990 GO:0005515
Lele21g1792 738 MobiDBLite consensus disorder prediction 1 229 - -
Lele21g1792 738 MobiDBLite consensus disorder prediction 176 190 - -
Lele21g1792 738 SUPERFAMILY TPR-like 478 683 IPR011990 GO:0005515
Lele21g1792 738 MobiDBLite consensus disorder prediction 196 220 - -
Lele21g1792 738 Gene3D Tetratricopeptide repeat domain 640 723 IPR011990 GO:0005515
Lele21g1792 738 Pfam Tetratricopeptide repeat 277 307 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 360 393 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 527 560 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 610 643 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 275 308 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 318 351 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 652 685 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 568 601 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 484 517 IPR019734 GO:0005515
Lele21g1792 738 SMART tpr_5 442 475 IPR019734 GO:0005515
Lele21g1792 738 Pfam Tetratricopeptide repeat 321 350 IPR019734 GO:0005515
Lele21g1792 738 ProSiteProfiles TPR repeat profile. 442 475 IPR019734 GO:0005515
Lele21g1792 738 ProSiteProfiles TPR repeat profile. 652 685 IPR019734 GO:0005515
Lele21g1792 738 Gene3D Tetratricopeptide repeat domain 425 610 IPR011990 GO:0005515
Lele21g1792 738 MobiDBLite consensus disorder prediction 79 105 - -
Lele21g1792 738 MobiDBLite consensus disorder prediction 16 50 - -
Lele21g1792 738 SUPERFAMILY TPR-like 273 423 IPR011990 GO:0005515
Lele21g1792 738 MobiDBLite consensus disorder prediction 139 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1792 Lele-ChrLele21 25581416 25583909 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1792 21 25581416 25583909 Lele17g1038 17 21001136 21003319 CCT
Lele21g1792 21 25581416 25583909 Lele18g0496 18 2938540 2942307 CCT
Lele21g1792 21 25581416 25583909 Lele19g0519 19 3009877 3012609 CCT
Lele21g1792 21 25581416 25583909 Lele20g0940 20 15580090 15582726 CCT
Lele21g1792 21 25581416 25583909 Lele22g1769 22 22911686 22914542 ECH
Lele21g1792 21 25581416 25583909 Lele21g1792 21 25581416 25583909 ECH
Lele21g1792 21 25581416 25583909 Lele23g0216 23 1449554 1452040 hybridization
Lele21g1792 21 25581416 25583909 Lele24g1729 24 22561475 22564313 hybridization