Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1154 ATGCCGCCGGCTGTAGTGAATCCACTAATGCCAGAATCTTTGTTGGTTCCATCCTCGAGCTCCGATTCTGTTTCTCAAGGATCAACGCCGGAGAATCGGCGTTTCGGAGATCTTAGAGGTTTGCAGTGGCGTATAAATCTCGGGGTTTTGCCGTCTTCTGCTTCCATTGATTATCTTCGTCGGGCCACTGCTGATTCTCGAAGGAGGTATGCTTCTTTGAGAAGGCACCTTCTGGCTGATCCACATACTCCAAAGCGTGGAAGTAATTGTCCCGATCCAGTCATAGATAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGTTTTTTTCGTAGTGCGGAGCTGGAGCGAATGGTTGATCAGGATTTGTCACGTTTATATCCAGAGCATGGGAGCTATTTCCAAACAACAGGATGCCAAGGCATGTTGAGACGAATTTTATTATTATGGTGTCTTAAGCATCCAGAATGTGGTTATAGACAAGGAATGCATGAATTATTGGCTCCTTTGTTATATGTTCTCCAAGTTGACGTGGAGTGTCTTTCAGAAACTCGAAAGCATTATGAAGATCATTTCACTGACAGATTTGATGGCCTTTTATGTCAAGAGAATGATCTTTCTTACAGTTTCGATTTTAGAAAATCCCCAGATATGATGGAGGATGAAATTGGTTCCCATGGAAATGCTAAGAAAGTCAGGAATCTTGAGGAGCTTGATCCTGTGATACAGAACATTGTATTGTTAAGTGATACTTATGGTGCTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTCATCGAACATGATGCCTACTGTATGTTTGATGCTTTATTGAGTGGGGCCCATGGTCTAGTTGCAATGGCAGATTTTTTCTCATCCTCCCCTGCAGTTGGGTCCCATACAGGCTTATCTCCTGTAATTGAAGCTTCTAGGGCACTGTATTGTTTGCTGTCCCTTGTGGATTCACCCCTGCATAGTCATCTTGTAGATCTTGGGGTTGAACCCCAGTACTTTGCGCTCCGTTGGTTGAGAGTTCTATTTGGACGGGAATTTTCACTTGACACCCTTCTGATAATCTGGGATGAGATCTTTGCATCAGATAACAGCAAAGTGGAAAAAGTTCCTGATGATGACATAGACTCTGGTATTGGGATCTTACATTCTCCTCGCGGGGCATTTATCTCAGCCATGGCTGTAGCAATGATTCTTCATTTAAGATCTTCACTACTTGCTACTGAAAATGCTACAAGCTGTCTTCAGAGATTATTAAACTTCCCTCAGAACACGAACATTAAAAAACTGCTAGAGAAGGCTAAATCTTTGCAGGCTCTCACGTTAAGTGCTGACATTTCAATACCGCCATCATTTTTTGATGTTTATAACCAAAGCAAATCACCAATTACAAGATCCCTGACCCTTCCATCAGAAACTGTTTCTCCGAGAACTCCCTTGAATCTGTTGCCTGATAGCTACTGGGAGGAAAAATGGAGAGTTGTCCACAAAACTGAAGAAACTAAGAAAGATGTGGCAGATAAACAGGTTCCTACCCGGAAAAAGGGATGGGCAGAAAAGATGAAATTCAGTCTCAAAAGAACAGAATCTGACCCATCTCCATCTAAGGTTCAGGGTGGCAAGACTGAATCTAAAGCATCTGTGAGGCGCAGTTTGCTGGAAGATCTTAATAGGGCACTTGGCTTAGATGAAGATACGGAGAAAACGCACTGCCTTGAAACATCAAATCAACAGGATAATATTTCTGAAAGAGTTGAAGGGGAGGATCAAGATGGTGGCTGTAAAGACAACAGTTGCACTGCAGAGGATAGATTTCTGAGTGGAAATACTGGCAGCGAGGAAAACTCATCTTCATTTACAGATCCAATCAGTCCTCCTAATGAAGTCAATGATCATGAAAATTACTCAGAGAAAAGTAGTGTTGCATCTAATTTATCTTTTAATGAAAGCAATGAAGATTCACTTTGTGGTTCCAATGTTACACCTCTTCCTGTCTCTTCTATTCCTGAGAACATGTCTCAGATCTCAGGATGCAATAATGATATCACTGGAAATTCAGCAACAGTTTCTAAGGAGAGTAAAGTGAACAAAATCGGGTGGTTTTGGAAGTTTGGTCGAAATAACAATGAGGTTATAACTGAGAAAGGAGGAGATGCTTCTGAAGCCACAAAGGCTGGCAACAGTTCTAGTAAAAGCAATACAACAGCTTCAGCTACATGCAGTAAAAGTAGTTCTGGTAGTTGCAAAGGCGATTCTGTCGACCAGAATGTTATGGGAACTTTGAGGAATCTTGGGCAGTCCATGCTGGAGAATATTCAGGTGATTGAGTCTGTTTTCCAGCAAGACAAAGGGCAAGGGACTTCATTGGAGAGCTTCTCCAAAAATATTCTGGTTGGCAAAGGGCAGGTTACTGCTATGACAGCTCTAAAGGAGCTTAGGAAAATCAGCAATCTTTTGTCTGAGATGTGA 2487 0.4202 MPPAVVNPLMPESLLVPSSSSDSVSQGSTPENRRFGDLRGLQWRINLGVLPSSASIDYLRRATADSRRRYASLRRHLLADPHTPKRGSNCPDPVIDNPLSQNPDSTWSRFFRSAELERMVDQDLSRLYPEHGSYFQTTGCQGMLRRILLLWCLKHPECGYRQGMHELLAPLLYVLQVDVECLSETRKHYEDHFTDRFDGLLCQENDLSYSFDFRKSPDMMEDEIGSHGNAKKVRNLEELDPVIQNIVLLSDTYGAEGELGIVLSEKFIEHDAYCMFDALLSGAHGLVAMADFFSSSPAVGSHTGLSPVIEASRALYCLLSLVDSPLHSHLVDLGVEPQYFALRWLRVLFGREFSLDTLLIIWDEIFASDNSKVEKVPDDDIDSGIGILHSPRGAFISAMAVAMILHLRSSLLATENATSCLQRLLNFPQNTNIKKLLEKAKSLQALTLSADISIPPSFFDVYNQSKSPITRSLTLPSETVSPRTPLNLLPDSYWEEKWRVVHKTEETKKDVADKQVPTRKKGWAEKMKFSLKRTESDPSPSKVQGGKTESKASVRRSLLEDLNRALGLDEDTEKTHCLETSNQQDNISERVEGEDQDGGCKDNSCTAEDRFLSGNTGSEENSSSFTDPISPPNEVNDHENYSEKSSVASNLSFNESNEDSLCGSNVTPLPVSSIPENMSQISGCNNDITGNSATVSKESKVNKIGWFWKFGRNNNEVITEKGGDASEATKAGNSSSKSNTTASATCSKSSSGSCKGDSVDQNVMGTLRNLGQSMLENIQVIESVFQQDKGQGTSLESFSKNILVGKGQVTAMTALKELRKISNLLSEM 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1154 828 Gene3D - 308 452 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 506 554 - -
Lele23g1154 828 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 37 329 IPR035969 -
Lele23g1154 828 MobiDBLite consensus disorder prediction 1 33 - -
Lele23g1154 828 SMART tbc_4 24 415 IPR000195 -
Lele23g1154 828 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 307 444 IPR035969 -
Lele23g1154 828 MobiDBLite consensus disorder prediction 13 32 - -
Lele23g1154 828 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 33 440 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 536 551 - -
Lele23g1154 828 Pfam Rab-GTPase-TBC domain 308 369 IPR000195 -
Lele23g1154 828 Pfam Rab-GTPase-TBC domain 117 201 IPR000195 -
Lele23g1154 828 MobiDBLite consensus disorder prediction 728 758 - -
Lele23g1154 828 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 101 285 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 588 604 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 506 535 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 722 758 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 573 649 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 75 101 - -
Lele23g1154 828 ProSiteProfiles TBC/rab GAP domain profile. 33 369 IPR000195 -
Lele23g1154 828 FunFam TBC1 domain family member 5 308 452 - -
Lele23g1154 828 MobiDBLite consensus disorder prediction 608 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1154 Lele-ChrLele23 17098558 17103117 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0979 18 6467798 6479776 Lele23g1154 23 17098558 17103117 CCT
Lele19g1010 19 6429295 6440308 Lele23g1154 23 17098558 17103117 CCT
Lele20g0438 20 12041932 12058851 Lele23g1154 23 17098558 17103117 CCT
Lele17g0532 17 17477859 17481455 Lele23g1154 23 17098558 17103117 CCT
Lele23g1154 23 17098558 17103117 Lele23g1154 23 17098558 17103117 ECH
Lele21g0897 21 6016891 6021406 Lele23g1154 23 17098558 17103117 hybridization
Lele22g0898 22 6067851 6072200 Lele23g1154 23 17098558 17103117 hybridization