Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1010 ATGAACTCAGTTCCCAGTGATATGGGTCTAGAGTTAGTACCTTCTTGCTTTGGATATGCTTACGAGAAATGGGAAGGGGTTGTGAATGTTTCCAGATGGCTTGTCCAGAAGGATTTGGTTGGCTTTGTTTCCACTTTCTGGAAGGCAGTGCATTTCTATGCTCTGGCTCTAACATGGTGTTGGGCTGGATATGCCCCTAGGTTGGTTTGTAACATTATTGCGAGGTTGATCCAGTCTGTTTACGCCTCTATATCCCACCTCAAAACACTTCTACCCCCCTTGAGCATTAAAGAAAATATTAATGGGATACCGTACATGGAGATAAAAGTTCTGAAATTGGCTGATAGATGTGATTATATTGCCCTGAGTAAGCTTTTATCAAGTTCCAAAGCTGCAAAGCATGCAGAGGAATTTGTTAAAGTAGAAACTGAAATCACATCCAATGAGGATATCCAGTACTTAAGTGATCAATTGGCAAAAGTTCAAATTGTTAATGACGTTAATAAGGATTTTGTTGTTGAGGCACTGAGATCAATTGCAGAGTTGATAACATATGGTGACCAACATGACTCAAGCTTTTTTGAATTCTTCATGGAAAGGCAGGTCATGGGAGATTTTGTACGTATTCTAAAACTGAGCACAACTGTTAGTGTTCCACTTCAGTTGCTGCAAACAGTGAGCATTATGATCCAAAACCTAAAAAGTGAACATGCTATTTACTATATGTTTAGTAATGAACATATGAACTACCTGATAACATATTCATTTGACTTTCGCAATGAAGAGCTATTGTCATACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAGAATACAATTTCTCTGCTTGTAAAGATTCACAATGAAGAAGTAGTTTCATTCCCACTATATGTTGAGGCCATACGCTTTGCCTTTCATGAGGAAAACATGGTTCGAACTGCAGTACGTACTGTGACCCTTAATGTTTATCATGTTGGAGATGAAAGTGTCAACAGATATATAACCAGCACACCTCACAACGATTACTTCTCAAACCTGGTTTCATTTTTTAAGAAGCAGTGTGTGGATTTAAATAGACTGATATCTGAAATATTAATAAGTCCACGGTCAGATTGGACCTCTACAATTCTTGCTGCTGTAGATGAAATTGAGGATAACCTTTACTATTTTAGTGACATTGTCTCTGCTGGAATTCCTGACGTCGGGAGTCTCATAACTGACAGCATCCTTATGCTTCTGATATTTCCATTACTTCTTCCTTCCCTGAGGATAGTTGCTGTTAATGACATGCAAAGTGGTGTTGTTACTTCTCTCTACTTACTTTGTTGCATCTTGAGGATCGTTAAAATCAAAGATTTGGCTAATACAATAGCTGCTGCTCTTTTTTATCCTTTGGAGGAATTTGCAAAAAGTTATAGGGGTAAAGTCAATGGCCATATATCTGATCGTGGTTTCATATCTGAAAGCCAAGAGTCAGACGATGGTAGTCTTACCAACAACGATGCTAGATGCCCAATGGACAATGCTTCATGCTCATCTAGTTCTTCAGGTTTTCATCCTGAACATGTTATCACACAAAATGATTGTAGTGATTCAAATTTAGCTGTAAGTTTCTGTAGGGAGGTTTTGCTTGCATGCCTAACACAGGGTGATGATCTAGAAGTTTTGGGTTCTTTGAATGTGCTTGCAACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTTGATGGGCTTGGAATTCTTCCACAACGCAAACAACACAAAAAACTTTTATTGCAAGCTTTAGTTGGTGAGACTTCAGATGAAGAGCAACTTTTTTCTTCTGAAAGTAGCTTGACGAAGGATGACATCAGTGGTGAGCTTGATGTCTATGTTGGAAAGATCAAGGAGGAATACGGAGTAATTTGTCCATCTTTTGAAGTGGGAACAAGCCCTCGTGTACATAGATTTCAGGTGCTTGATGCATTAGTCAGTCTTTTTTGCCGTTCTAACTTGTCTGCAGAGACCCTTTGGGATGGTGGTTGGCTTTTGCGCCAGTTGCTTCCTTACAGTGAGGCAGAATTCAACAACCATCACCTTGAATTGCTGAAAGTTTCATATAAGAATTGTGCTTCTGCTCTTGTAGAGGAGGTTAAAGGTATCTGGTCTGATCTACTTGTAACTGTTCTCCATGATGAGTGGAGAAGGTGCAAAAGAGCAATGGAGTCATCATCTCCTCGGAAGGACCCAAAGTGCATGCTTATTCCACCTCAGAAGTTCTCTTCAGAAGATGATATTCCAGATGGGTCATCACTTGCTGCTGGTGAAAGAATGCACGAGTTGGTGAAGGTGTTTGTACTTCTGCACCAACTTCAAATTTTCACCCTTGGAAGACCTTTGCCTGAGCAACCTCCCATTCTTCCTCCTGGTGATCTTCCTGTGGATTCTCGTGCCCATACTTCTGGCCTTGATGCACCATTCCCAAAGCCAGACACTGAAGTTAGTGTTGCTAATGCTGTGCCTTGTAGAATCGCTTTTGAGAGGGGCAAAGAGCGTCATTTTTGCTTGCTAGCAATCTCCGTGGGAATATCAGGGTGGCTTATGCTTGTAGAAGAATTGCCGTTGAAGAAACGATATGGAGTTGTTCGAGTTACTGCACCTTTGGCCGGGAGTAATCCCAGGATTGATGGAAAACGTCCGAGATGGTTACACTTGCGAATTCGTCCATCCTCTGTACCCTATTTGGATCCTGCCAAGTGCCAGGGCTTCGGGAAAATAAAAGCGAAAGCTTTAGACGGAAGATGGACCTTGGCGTTCAGAGACGAAGAGTCTTGCAAGACGGCTTTGCACATGATTGAAGAAGAGATTAATCTTCAAAGAGATGAGGTCCACAGAAGACTTAAACCTTTGCTTAATCTCGAAAATTCAACTACTCCTTCTGTTCGTATACCAGAGGGTTCACCTTTGTATTCAACGCCTCTCAATTCATTGTAA 2985 0.4074 MNSVPSDMGLELVPSCFGYAYEKWEGVVNVSRWLVQKDLVGFVSTFWKAVHFYALALTWCWAGYAPRLVCNIIARLIQSVYASISHLKTLLPPLSIKENINGIPYMEIKVLKLADRCDYIALSKLLSSSKAAKHAEEFVKVETEITSNEDIQYLSDQLAKVQIVNDVNKDFVVEALRSIAELITYGDQHDSSFFEFFMERQVMGDFVRILKLSTTVSVPLQLLQTVSIMIQNLKSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKNTISLLVKIHNEEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNVYHVGDESVNRYITSTPHNDYFSNLVSFFKKQCVDLNRLISEILISPRSDWTSTILAAVDEIEDNLYYFSDIVSAGIPDVGSLITDSILMLLIFPLLLPSLRIVAVNDMQSGVVTSLYLLCCILRIVKIKDLANTIAAALFYPLEEFAKSYRGKVNGHISDRGFISESQESDDGSLTNNDARCPMDNASCSSSSSGFHPEHVITQNDCSDSNLAVSFCREVLLACLTQGDDLEVLGSLNVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGETSDEEQLFSSESSLTKDDISGELDVYVGKIKEEYGVICPSFEVGTSPRVHRFQVLDALVSLFCRSNLSAETLWDGGWLLRQLLPYSEAEFNNHHLELLKVSYKNCASALVEEVKGIWSDLLVTVLHDEWRRCKRAMESSSPRKDPKCMLIPPQKFSSEDDIPDGSSLAAGERMHELVKVFVLLHQLQIFTLGRPLPEQPPILPPGDLPVDSRAHTSGLDAPFPKPDTEVSVANAVPCRIAFERGKERHFCLLAISVGISGWLMLVEELPLKKRYGVVRVTAPLAGSNPRIDGKRPRWLHLRIRPSSVPYLDPAKCQGFGKIKAKALDGRWTLAFRDEESCKTALHMIEEEINLQRDEVHRRLKPLLNLENSTTPSVRIPEGSPLYSTPLNSL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1010 994 MobiDBLite consensus disorder prediction 973 994 - -
Lele19g1010 994 Pfam Uncharacterised conserved protein 176 326 IPR019155 -
Lele19g1010 994 PANTHER UNCHARACTERIZED 147 969 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1010 Lele-ChrLele19 6429295 6440308 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele19g1010 19 6429295 6440308 Lele21g0897 21 6016891 6021406 CCT
Lele19g1010 19 6429295 6440308 Lele22g0898 22 6067851 6072200 CCT
Lele19g1010 19 6429295 6440308 Lele23g1154 23 17098558 17103117 CCT
Lele19g1010 19 6429295 6440308 Lele24g0870 24 5949342 5954013 CCT
Lele17g0531 17 17458338 17471597 Lele19g1010 19 6429295 6440308 hybridization
Lele18g0979 18 6467798 6479776 Lele19g1010 19 6429295 6440308 hybridization