Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0979 ATGTGGCTTTCCTTCTGGAGATCCAGAGATCGTTTTTCCCTAGATGAACTCAGGTACTTAAGTGATCAATTGGCAAGAGTGCAAATTGTTACTGACGTTAATAAGGATTTTGTTGTTGAGGCACTTAGATCTATTGCGGAGTTGATAACATACGGTGACCAACATGACTCAAGCTTTTTTGAATTCTTCATGGAAAGGCAAGTCATGGGAGAGTTTGTACGTATTCTAAAACTGAGCACAACTGTTAGTGTTTCACTTCAGTTGCTGCAAACTGTGAGCATTATGATCCAAAACCTAAAAAGTGAACATGCTATTTACTATATGTTTAGTAATGAACATATGAACTACCTGATAACATATTCATTTGACTTTCGCAATGAAGAGCTATTGTCATACTACATATCCTTTTTGAGGGCAATAAGTGGAAAATTGAACAAGAATACAATTTCTCTGCTTGTAAAGACTCACAATGAAGAAGTAGTTTCTTTCCCACTATATGTTGAGGCCATACGCTTTGCCTTTCATGAGGAAAACATGGTTCGAACTGCCGTACGTACTGTGACCCTTAATGTTTATCATGTTGGAGATGAAAGTGTCAACAGATATATAACCAGCGCACCTCACACTGATTACTTCTCAAACCTGGTTTCATTTTTTAAGAAGCAGAGTGTGGATTTAAATAGACTGATATCTGAAATATTAATAAATCCACGGTCAGATTGGACCTCTACAATTCATGCTGCTGTAGATGAAATTGAGGATAACCTTTACTATTTTAGTGACATTGTCTCTGCTGGAATTCCTGATGTTGGGAGGCTTATAACTGACATCATCCTTATGCTTCTGATATTTCCATTACTTCTTCCTTCCCTGAGGATAGTTGCTGTTAATGACATGCAAAGTGGTGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTGAGGATCGTCAAAATCAAAGATTTGGCAAATACAATAGCTGCTGCTCTTTTTTATCCCTTGGAGGCATTTGCAAAAAGTTATAGGGGTAAAGTCAATGGCCATATATCTGATCGGGGTTTCACATCTGAAAGCCAAGAGTCAGAGGATGGTAGTCTTACCGACAATGATGCTAGATGCTCAATGGACAATGCTTCATGCTCATCTAGTTCTTCAGGTTTTCATCCTGAACATGTTATCACACAAAATGGTTCTAGTGATTCAAATTTAGCTGTAAGGGAGGTTTTGCTTGCATACCTAACACGGGGGGATGATCTAGAAGTTTTGGGGTCTTTGAATGTGCTTGCAACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTTGATGGGCTTGGAATTCTTCCACAACGCAAACAACACAAAAAACTTCTATTGCAAGCTTTAGTCGGTGAGGCTTCAGGTGAAGAGCAACTTTTTTCTTCAGAAAGTAGCTTGACGAAGGATGACATCAATGGTGAGCTTGATGTCTATGTTGGAAAGATCAAGGAGCAATATGGAGTACTTTGTCCATCTTCTGAAGTAGGAACAAGCCCTCGTGTACATAGATTTCAGGTGCTTGATGCATTAGTCAGTCTCTTTTGCCGTTCTAATTTATCTGCAGAGACCCTTTGGGATGGTGGTTGGCTTTTGCGCCAGTTGCTTCCTTACAGTGAGGCAGAATTCAACAACCATCACCTTGAATTGCTGAAAGTTTCATATAAGAATTGTGCTTCTGCTCTTGTAGAGGAGGTTAAAGGGATCTGGTCTGATCTACTTGTAACGGTTCTCCATGATGAGTGGAGAAGGTGCAAAAGAGCAATGGAGTCATCATCTCCTCGGAAGGACCCAAAGTGCATGCTTATTCCACCTCAGAAGTTCTCTTCAGAAGATGATATTCCAGATGGGTCATCCCTTGCTGCTGGTGAAAGAATGCACGAGTTGGTGAAGGTGTTTGTACTTCTGCTGCAACTTCAAATTTTCACCCTTGGAAGACCTTTGCCTGAGCAACCTCCCATTCTTCCTCCTGGTGATCTTCCTGTGGATTCTCGTGCCCAGACTTCTGGCCTTGATGCACCATTCCCAAAACCAGGCACTGAAGTTAGTCTTGCTAATGCTGTGCCTTGTAGAATCGCTTTTGAGAGGGGCAAAGAACGTCATTTTTGCTTTCTAGCAATCTCTCTGGGAATATCAGGGTGGCTTATGCTTGTAGAAGAATTGCCGTTGAAGAAGCGATATGGAGTTGTTCGAGTCACTGCACCTTTGGCTGGGAGTAAGCCCAGGATTGATGAAAAACATCCGAGATGGTTACACTTGCGGATTCGTCCATCCTCTCTACCATTTTTGGATCCAGCCAAGTGCCAGGGCCACGGGAAAATAAAAGCAAAAGCTTTAGATGGAAGATGGACCTTGGCATTCAGAGACGACGGCTCTTGCAAGACAGCTTTGCACATGATTGAAGAAGAGATTAATCTTCAAAGAGATGAGGTCCACAGAAGACTTAAACCTTTGCTTAATCTTGAAAATTCAACTACCCCTTCTGTTCGTATACCGGAGGATTCACCTTTGTATTCAACGCCTCTCAATTCATCGTAA 2574 0.413 MWLSFWRSRDRFSLDELRYLSDQLARVQIVTDVNKDFVVEALRSIAELITYGDQHDSSFFEFFMERQVMGEFVRILKLSTTVSVSLQLLQTVSIMIQNLKSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTHNEEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNVYHVGDESVNRYITSAPHTDYFSNLVSFFKKQSVDLNRLISEILINPRSDWTSTIHAAVDEIEDNLYYFSDIVSAGIPDVGRLITDIILMLLIFPLLLPSLRIVAVNDMQSGVVTSLYLLCCILRIVKIKDLANTIAAALFYPLEAFAKSYRGKVNGHISDRGFTSESQESEDGSLTDNDARCSMDNASCSSSSSGFHPEHVITQNGSSDSNLAVREVLLAYLTRGDDLEVLGSLNVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEASGEEQLFSSESSLTKDDINGELDVYVGKIKEQYGVLCPSSEVGTSPRVHRFQVLDALVSLFCRSNLSAETLWDGGWLLRQLLPYSEAEFNNHHLELLKVSYKNCASALVEEVKGIWSDLLVTVLHDEWRRCKRAMESSSPRKDPKCMLIPPQKFSSEDDIPDGSSLAAGERMHELVKVFVLLLQLQIFTLGRPLPEQPPILPPGDLPVDSRAQTSGLDAPFPKPGTEVSLANAVPCRIAFERGKERHFCFLAISLGISGWLMLVEELPLKKRYGVVRVTAPLAGSKPRIDEKHPRWLHLRIRPSSLPFLDPAKCQGHGKIKAKALDGRWTLAFRDDGSCKTALHMIEEEINLQRDEVHRRLKPLLNLENSTTPSVRIPEDSPLYSTPLNSS 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0979 857 MobiDBLite consensus disorder prediction 837 857 - -
Lele18g0979 857 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
Lele18g0979 857 PANTHER UNCHARACTERIZED 1 834 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0979 Lele-ChrLele18 6467798 6479776 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0979 18 6467798 6479776 Lele21g0897 21 6016891 6021406 CCT
Lele18g0979 18 6467798 6479776 Lele22g0898 22 6067851 6072200 CCT
Lele18g0979 18 6467798 6479776 Lele23g1154 23 17098558 17103117 CCT
Lele18g0979 18 6467798 6479776 Lele24g0870 24 5949342 5954013 CCT
Lele18g0979 18 6467798 6479776 Lele19g1010 19 6429295 6440308 hybridization
Lele18g0979 18 6467798 6479776 Lele20g0438 20 12041932 12058851 hybridization