Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0180 ATGCCTCCATCGTCGAACCCGTCCCTCAGCCTGAAACAACGGGTTTTCGTGTGCCTCGCCAAGCTTTCCGACCGAGATACACAGTTGCTTGCTGCGGCCGAGCTTGAGTCGATTGCTCGGAACCTCGATCCGAGCACTCTGTCGGTTTTTCTCTCCTGCATACACTCCACCGATGCGTCGGACAAACCTTCGGTTCGGAGACAATGCGTGCGAGTCTTGGAGGTGCTGTGTGAGACGCATGGAAATTCGCTCTCTCCTTATCTTTCGAAAATTCTAGCAAATATAGTTCGTCGGCTCCGTGACCCCGATTCGTCGGTTCGATCCGCTTGTGTGAATTCCGTTTCGGCATTGTCGACTCACGTCACTAAGCAACCGTTTTCCTCTTTTCTGAAACCGTTCGCGGAGGCACTGTTCACCGAGCAGGACCATAATGCGCAGATGGCCGCGGCGCTTTGTTTGGCTTCTGCTGTTGATGCCGTTCCGGATCCGGAACCGGCAAGATTGATGAAGCTCTTGCCCAGGTTCGAGAAGTTACTGAAATGCGAGGGATTTAAGGCAAAGCCGGCCCTGTTGACGCTGATCGGAAGCGTTATTGAGGTTGGTGCGGCATCGAGTCCTGGGGCTTTGACAAAGTTGGTTCCTTGTGTGATGGAATTCTTGAGTAACAAAGATTGGGCTGCAAGGAAGGCTGCGGCCGAGGCGTTGATGAAGCTGGCAATAGTGGAAAGGGAAATGTTGTCAGAACACAAGGCGAGATGTTTGGAAGTTTTCGAGAATCGACGATTCGATAAGGTGAAGGTTGTTCGGGAAGTTATGAATCAGATGCTGGAAGCGTGGAAGCAGATAGCTGATGTTTCTGATGAATTTTCTCCACCTCCTCAATCGCAAGCTTCATCCAAAGAGAATGCAAGTGATAGACGCTATCCGCCAGTCGTGCAGAGTTCATGCGCCCCTGGTTCTGTAGTGTCACAATTTCGGAAAAAATCCATTCCAGTTACCATATCTACCCCTCCGGACAGTTATACTGCCAGCAAAACTAAGAAGATTAGTCCTTTAAGTAGTAGCAAGAGAATGAACTCAAATGTGCCGCGAAAGCTGAGCCAGAAGAACTGGGATGTTACTGTGCCGAATGCTCCCTCTGCGGCTTACCGGGGTGATCCTGAAGAGAGGGACGACTTTGTCACGGAAAGAAGCAAAAAGGAGAAAACACGGTTTTCAAAGCCGGAAATGAGAAGGGCTCTTTTTGGTAAAAACACTGATGAAAAAATTCACAAGGGGTCCAAAACTGGATCTCGCGTAGTTCCTTGCCATGAAGACAGTGAAGACTCAGTTGCTGTTAGTAATGGCGCCAAAGATCAAAACAAGAATGACAAAGAGTGTGAAGATTTATCTTTGATCCGCAACCAGTTATCTGACATTGAAAAGCAGCAATCGAGCTTGCTTGATCTTCTGCAGAGATTCATTGGAAGCTCACAAAATGGAATGCAATCTTTGGAGACTCGTGTGCATGGCCTTGAGTTGGCATTAGATGAGATCTCTTATGATTTAGCTGTATCAAGTGGAAGAATGACTAATGCTGATGCTCCCGGGAGGACTTGTTGCTTGCTGTCTGGTGCAGAATTCTTAAGCTCCAAGTTCTGGAGGAAAACACAAGGCCGGTATTCATCCTCCTCGATCTCTAGATCTGCTGGCACTCCATCGCTAGCCACAATGCACTACGGAGCTGACAAGAATGGCAGTATTGAGAGAAATTACAGATTAAGGTTTCGTGGTGATCGAGGTTTCATCACTAATCCTCTGGCAGAGGTTCATTTGAACTCAAGGGAGACATCAAATATTTCACATGAGTAA 1851 0.4803 MPPSSNPSLSLKQRVFVCLAKLSDRDTQLLAAAELESIARNLDPSTLSVFLSCIHSTDASDKPSVRRQCVRVLEVLCETHGNSLSPYLSKILANIVRRLRDPDSSVRSACVNSVSALSTHVTKQPFSSFLKPFAEALFTEQDHNAQMAAALCLASAVDAVPDPEPARLMKLLPRFEKLLKCEGFKAKPALLTLIGSVIEVGAASSPGALTKLVPCVMEFLSNKDWAARKAAAEALMKLAIVEREMLSEHKARCLEVFENRRFDKVKVVREVMNQMLEAWKQIADVSDEFSPPPQSQASSKENASDRRYPPVVQSSCAPGSVVSQFRKKSIPVTISTPPDSYTASKTKKISPLSSSKRMNSNVPRKLSQKNWDVTVPNAPSAAYRGDPEERDDFVTERSKKEKTRFSKPEMRRALFGKNTDEKIHKGSKTGSRVVPCHEDSEDSVAVSNGAKDQNKNDKECEDLSLIRNQLSDIEKQQSSLLDLLQRFIGSSQNGMQSLETRVHGLELALDEISYDLAVSSGRMTNADAPGRTCCLLSGAEFLSSKFWRKTQGRYSSSSISRSAGTPSLATMHYGADKNGSIERNYRLRFRGDRGFITNPLAEVHLNSRETSNISHE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0180 616 MobiDBLite consensus disorder prediction 421 439 - -
Lele23g0180 616 MobiDBLite consensus disorder prediction 288 303 - -
Lele23g0180 616 MobiDBLite consensus disorder prediction 421 458 - -
Lele23g0180 616 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Lele23g0180 616 MobiDBLite consensus disorder prediction 384 406 - -
Lele23g0180 616 MobiDBLite consensus disorder prediction 336 375 - -
Lele23g0180 616 Gene3D - 10 336 IPR011989 -
Lele23g0180 616 ProSiteProfiles HEAT repeat profile. 212 250 IPR021133 -
Lele23g0180 616 Pfam HEAT repeat 212 239 IPR000357 GO:0005515
Lele23g0180 616 MobiDBLite consensus disorder prediction 287 315 - -
Lele23g0180 616 FunFam TORTIFOLIA1-like protein 3 isoform A 3 360 - -
Lele23g0180 616 MobiDBLite consensus disorder prediction 336 406 - -
Lele23g0180 616 SUPERFAMILY ARM repeat 6 286 IPR016024 -
Lele23g0180 616 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 566 IPR033337 GO:0005874|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0180 Lele-ChrLele23 1151035 1153412 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1010 17 20837998 20839200 Lele23g0180 23 1151035 1153412 CCT
Lele19g0547 19 3173915 3175117 Lele23g0180 23 1151035 1153412 CCT
Lele20g0903 20 15406727 15411140 Lele23g0180 23 1151035 1153412 CCT
Lele21g1830 21 25857242 25859610 Lele23g0180 23 1151035 1153412 hybridization
Lele22g1805 22 23168969 23171353 Lele23g0180 23 1151035 1153412 hybridization