Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1760 ATGCTAAGGCTCGCTTCCAAAAGACTTGTAGGAATCGCGTCGCGGCAGGCGCCGACGTCCCAGCTTCTGCCTCGGTTTTACCACGAGAGGGTTGTTGAGCACTACAACAATCCCCGGAATGTTGGATCCTTCAATAAGAATGACGCCGACGTCGGTACGGGCGTGGTCGGTGCACCTGCATGTGGCGATGTTATGAAACTTCAGATTAAGGTTGATGAGACCGGTAAGATTGTTGATGCTTGCTTCAAGACCTTCGGCTGTGGCTCCGCCATTGCCTCTTCCTCTCTAGCCACGGAATGGGTGAAGGGAAAGCAAATGGAAGAAGCTCTATCCATTAAAAACTCTGAAATTGCGAAGCATCTTTCACTTCCGCCAGTTAAGCTTCACTGCAGCATGCTGGCTGAGGATGCCATTAAAGCAGCTGTGAAAGACTATGAAACTAGGCGTGCTAATGGAAATGGCAGTGAAGGTTCAGCTTCTGGAGAGAAGGCCACCCCTGCTTGA 504 0.5079 MLRLASKRLVGIASRQAPTSQLLPRFYHERVVEHYNNPRNVGSFNKNDADVGTGVVGAPACGDVMKLQIKVDETGKIVDACFKTFGCGSAIASSSLATEWVKGKQMEEALSIKNSEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYETRRANGNGSEGSASGEKATPA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1760 167 FunFam Iron-sulfur cluster assembly scaffold protein IscU 25 152 - -
Lele22g1760 167 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 11 156 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele22g1760 167 TIGRFAM iscU: FeS cluster assembly scaffold IscU 27 149 IPR011339 GO:0005506|GO:0016226|GO:0051536
Lele22g1760 167 SUPERFAMILY SufE/NifU 26 150 - -
Lele22g1760 167 Gene3D - 26 155 - -
Lele22g1760 167 CDD IscU_like 27 141 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele22g1760 167 Pfam NifU-like N terminal domain 27 150 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1760 Lele-ChrLele22 22844634 22845757 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1760 22 22844634 22845757 Lele17g1050 17 21094059 21096334 CCT
Lele22g1760 22 22844634 22845757 Lele18g0488 18 2878930 2881457 CCT
Lele22g1760 22 22844634 22845757 Lele19g0507 19 2905704 2908074 CCT
Lele22g1760 22 22844634 22845757 Lele20g0948 20 15626662 15629172 CCT
Lele22g1760 22 22844634 22845757 Lele23g0224 23 1540501 1541755 hybridization
Lele22g1760 22 22844634 22845757 Lele24g1721 24 22491658 22492577 hybridization