Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1050 ATGCAATCTTTAAGTTCTAAGGCTCTCGTGAATCTGCGCTTGCCGGGTCGCGGGGGGTCTGATTTCTACGATAACGAGAACCGAATAAGGAGGCATTGGGTCAATTGTAGGAACCTGAAGCGAACGAATGGAATCGTAGCTTGTATTGCAGACAGGAATGAGAATGGCAGAGGGGAGAGTCGGAGTACGAGTCGAAGTGCGAGTCCGAGCTCGTTTCTGTCTCGGAGCCACACATATGCCCTCTTAAAGCAGCAAATGGAGCTAGCTGCGAAATCTGAGGACTACAAGGAAGCTGCGAGGATTCGTGACTCGATTAAATCATTTGAAGAGGAGGAGCCAGTTTTGCGTCTGCGGAGATTAATGAAAGAAGCAATTGCTGAGGAGAAGTTCACGGATGCGGCAAAATATCGTGATGAGCTTAGAGAAATTGGTCCACACGGTCTCTTAAAATGTTCAAGTAATGCAACAACCTTGGGAATCAGAGTTCAAGTTAGAAGTGTATATATAGAGGGTAGAAGTCAACCTTCAAAGGGGCTTTACTTTTTTGCATACAGAATCAGAATTACGAACAACTCTGACCGCCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACAGATGCAAATGGGAAGACAGAAAATGTCTGGAAGGTGACTTTGAGATGA 666 0.452 MQSLSSKALVNLRLPGRGGSDFYDNENRIRRHWVNCRNLKRTNGIVACIADRNENGRGESRSTSRSASPSSFLSRSHTYALLKQQMELAAKSEDYKEAARIRDSIKSFEEEEPVLRLRRLMKEAIAEEKFTDAAKYRDELREIGPHGLLKCSSNATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDRPVQLLRRHWIITDANGKTENVWKVTLR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1050 221 ProSiteProfiles UVR domain profile. 76 111 IPR001943 GO:0005515
Lele17g1050 221 PANTHER OS05G0170800 PROTEIN 35 216 - -
Lele17g1050 221 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 78 110 IPR036876 -
Lele17g1050 221 Pfam UvrB/uvrC motif 82 110 IPR001943 GO:0005515
Lele17g1050 221 Pfam UvrB/uvrC motif 116 143 IPR001943 GO:0005515
Lele17g1050 221 ProSiteProfiles ApaG domain profile. 154 221 IPR007474 -
Lele17g1050 221 SUPERFAMILY ApaG-like 156 215 IPR036767 -
Lele17g1050 221 Pfam ApaG domain 172 215 IPR007474 -
Lele17g1050 221 Gene3D ApaG domain 150 219 IPR036767 -
Lele17g1050 221 ProSiteProfiles UVR domain profile. 111 146 IPR001943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1050 Lele-ChrLele17 21094059 21096334 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1784 21 25506762 25508024 Lele17g1050 17 21094059 21096334 CCT
Lele22g1760 22 22844634 22845757 Lele17g1050 17 21094059 21096334 CCT
Lele23g0224 23 1540501 1541755 Lele17g1050 17 21094059 21096334 CCT
Lele24g1721 24 22491658 22492577 Lele17g1050 17 21094059 21096334 CCT
Lele17g1050 17 21094059 21096334 Lele19g0507 19 2905704 2908074 hybridization
Lele17g1050 17 21094059 21096334 Lele20g0948 20 15626662 15629172 hybridization