Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1721 ATGAAACTTCAGATTAAGGTTGATGAGACCGGTAAGATTGTTGATGCTTGCTTCAAGACCTTCGGCTGTGGCTCCGCCATTGCCTCTTCCTCTCTAGCCACGGAATGGGTGAAGGGAAAGCAAATGGAAGAAGCTCTATCCATTAAAAACTCTGAAATTGCGAAGCATCTTTCACTTCCGCCAGTTAAGCTTCACTGCAGCATGCTGGCTGAAGATGCCATTAAAGCAGCTGTGAAAGACTATGAAACTAAGCTTGCTAATGGAAATGGTAGTGAAGGTTCAGCTTCTGGAGAGAAGGCCACCCCTGCTTGA 312 0.4615 MKLQIKVDETGKIVDACFKTFGCGSAIASSSLATEWVKGKQMEEALSIKNSEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYETKLANGNGSEGSASGEKATPA 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1721 103 FunFam Iron-sulfur cluster assembly enzyme ISCU, mitochondrial 1 86 - -
Lele24g1721 103 CDD IscU_like 1 77 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele24g1721 103 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 1 92 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lele24g1721 103 SUPERFAMILY SufE/NifU 1 84 - -
Lele24g1721 103 Gene3D - 1 86 - -
Lele24g1721 103 Pfam NifU-like N terminal domain 1 85 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1721 Lele-ChrLele24 22491658 22492577 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1721 24 22491658 22492577 Lele17g1050 17 21094059 21096334 CCT
Lele24g1721 24 22491658 22492577 Lele18g0488 18 2878930 2881457 CCT
Lele24g1721 24 22491658 22492577 Lele19g0507 19 2905704 2908074 CCT
Lele24g1721 24 22491658 22492577 Lele20g0948 20 15626662 15629172 CCT
Lele21g1784 21 25506762 25508024 Lele24g1721 24 22491658 22492577 hybridization
Lele22g1760 22 22844634 22845757 Lele24g1721 24 22491658 22492577 hybridization